RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 SPRED1Q7Z699 444 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 CLNKQ7Z7G1 428 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 ZFAND4Q86XD8 727 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 C1QL4Q86Z23 238 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 PLD3Q8IV08 490 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 RNF175Q8N4F7 328 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 FITM2Q8N6M3 262 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 GBP7Q8N8V2 638 aaPredicted RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 ANKRD53Q8N9V6 530 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 HUS1BQ8NHY5 278 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 CCT6BQ92526 530 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 ANAPC16Q96DE5 110 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 MARK4Q96L34 752 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 APOLD1Q96LR9 279 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 PPP3R2Q96LZ3 170 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 PPM1MQ96MI6 270 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 CATSPER2Q96P56 530 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 MTERF1Q99551 399 aaKnown RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 SARGQ9BW04 601 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 KRTAP9-3Q9BYQ3 159 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 RAB33BQ9H082 229 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 ABCG4Q9H172 646 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 RHBGQ9H310 441 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 EPB41L1Q9H4G0 881 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 SYNPO2LQ9H987 977 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 BRF2Q9HAW0 419 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 LRTM1Q9HBL6 345 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 SAR1AQ9NR31 198 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 AIG1Q9NVV5 245 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 C1orf109Q9NX04 203 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 ASIC5Q9NY37 505 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 LRIT1Q9P2V4 623 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 EPHA6Q9UF33 1036 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 ZFP69BQ9UJL9 534 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 PADI4Q9UM07 663 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 SNX7Q9UNH6 387 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 KLHL20Q9Y2M5 609 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 PCDHGB2Q9Y5G2 931 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 COPG1Q9Y678 874 aaKnown RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 SPTBP11277 2137 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 MYO15AQ9UKN7 3530 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 ADAMTS20P59510 1910 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 PIEZO1Q92508 2521 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 DNAH14Q0VDD8 3507 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 TMEM82A0PJX8 343 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 FEZF1A0PJY2 475 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 TLCD2A6NGC4 264 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 CCT8L1PA6NM43 557 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 CAPN14A8MX76 684 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 MAGEB17A8MXT2 336 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 EBAG9O00559 213 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 UBDO15205 165 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 ZW10O43264 779 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 DUX1O43812 170 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 CCDC22O60826 627 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 CTSVO60911 334 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 PEX11AO75192 247 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 SEMA3DO95025 777 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 TBX6O95947 436 aaPredicted RBP6.34□□□□□ -1.39
USP48-208ENST00000479177 ZNF806P0C7X5 589 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 PNLIPP16233 465 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 AMD1P17707 334 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 NCF2P19878 526 aaPredicted RBP6.34□□□□□ -1.39
USP48-208ENST00000479177 GSTM2P28161 218 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 AHRP35869 848 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 NBL1P41271 181 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 ATXN3P54252 364 aaPredicted RBP6.34□□□□□ -1.39
USP48-208ENST00000479177 GFERP55789 205 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 OR1D5P58170 312 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 RPS15AP62244 130 aaKnown RBP6.34□□□□□ -1.39
USP48-208ENST00000479177 RPS13P62277 151 aaKnown RBP6.34□□□□□ -1.39
USP48-208ENST00000479177 PHEXP78562 749 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 CFHR1Q03591 330 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 RELAQ04206 551 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 CYP4F3Q08477 520 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 SQLEQ14534 574 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 RBBP5Q15291 538 aaKnown RBP6.34□□□□□ -1.39
USP48-208ENST00000479177 SF3A2Q15428 464 aaKnown RBP6.34□□□□□ -1.39
USP48-208ENST00000479177 ZIC1Q15915 447 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 ZSCAN26Q16670 478 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 INAVAQ3KP66 663 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 GALNTL6Q49A17 601 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 ATP6AP1LQ52LC2 224 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 IRGCQ6NXR0 463 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 LCNL1Q6ZST4 164 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 RNF44Q7L0R7 432 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 VN1R4Q7Z5H5 301 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 SPATA19Q7Z5L4 167 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 TBC1D19Q8N5T2 526 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 CPSF7Q8N684 471 aaKnown RBP6.34□□□□□ -1.39
USP48-208ENST00000479177 EID2Q8N6I1 236 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 C19orf47Q8N9M1 422 aaKnown RBP6.34□□□□□ -1.39
USP48-208ENST00000479177 MFSD9Q8NBP5 474 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 TTLQ8NG68 377 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 OR6C4Q8NGE1 309 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 CREB3L4Q8TEY5 395 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 NAT6Q93015 286 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 MTFMTQ96DP5 389 aaKnown RBP6.34□□□□□ -1.39
USP48-208ENST00000479177 CMTM7Q96FZ5 175 aa6.34□□□□□ -1.39
USP48-208ENST00000479177 APIPQ96GX9 242 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms