RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 CLEC1AQ8NC01 280 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 WDR20Q8TBZ3 569 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 METTL21AQ8WXB1 218 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 BBC3Q96PG8 261 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-215ENST00000478531 FRG2BQ96QU4 278 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 KCNA7Q96RP8 456 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 ZNF382Q96SR6 550 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 TGIF2Q9GZN2 237 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 MID1IP1Q9NPA3 183 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 FARSBQ9NSD9 589 aaKnown RBP6.51□□□□□ -1.37
BRCA1-215ENST00000478531 ARGLU1Q9NWB6 273 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-215ENST00000478531 OXSMQ9NWU1 459 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 ADGRE2Q9UHX3 823 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 ZNF225Q9UK10 706 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 NBASA2RRP1 2371 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 FAM227AF5H4B4 570 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 PLPP1O14494 284 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 TPD52L2O43399 206 aaKnown RBP6.5□□□□□ -1.37
BRCA1-215ENST00000478531 CRCPO75575 148 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 ETHE1O95571 254 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 PDYNP01213 254 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 IGHEP01854 428 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 C8orf89P0DMQ9 161 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 SMIM10L1P0DMW3 83 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 JAK1P23458 1154 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 HMOX2P30519 316 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 ALDH3A1P30838 453 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 RRADP55042 308 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 MTTPP55157 894 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 KCNAB2Q13303 367 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 CASP8Q14790 479 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 AP5B1Q2VPB7 878 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 TUBB8Q3ZCM7 444 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 TMEM35AQ53FP2 167 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 DCAF10Q5QP82 559 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 PCSK4Q6UW60 755 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 KIRREL2Q6UWL6 708 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 ZCCHC23Q6ZST2 131 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 UBE3DQ7Z6J8 389 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 CROCCP2Q86T23 111 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 EXOC3L1Q86VI1 746 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 TMEM102Q8N9M5 508 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-215ENST00000478531 SRFBP1Q8NEF9 429 aaKnown RBP6.5□□□□□ -1.37
BRCA1-215ENST00000478531 MYRIPQ8NFW9 859 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 OR11G2Q8NGC1 345 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 AGAP11Q8TF27 550 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 SELENOMQ8WWX9 145 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 TSLPQ969D9 159 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 RGMAQ96B86 450 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 TBC1D20Q96BZ9 403 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 SMIM10Q96HG1 83 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 MAGEB10Q96LZ2 347 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-215ENST00000478531 QRFPRQ96P65 431 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 IP6K3Q96PC2 410 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 OR1F2PQ96R84 312 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 SERINC2Q96SA4 455 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 CSF3RQ99062 836 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 ZNF160Q9HCG1 818 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 KCNK9Q9NPC2 374 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 TRPS1Q9UHF7 1281 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 FBXW2Q9UKT8 454 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 SNX6Q9UNH7 406 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 SLC12A4Q9UP95 1085 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 STK38LQ9Y2H1 464 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 FIS1Q9Y3D6 152 aa6.5□□□□□ -1.37
BRCA1-215ENST00000478531 IGHV3-20A0A0C4DH32 117 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 WDR91A4D1P6 747 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 EIF4E1BA6NMX2 242 aaKnown RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 MKRN2OSH3BPM6 223 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 MANBAO00462 879 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 UBFD1O14562 309 aaKnown RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 ATXN7O15265 892 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 TYROBPO43914 113 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 TRIM13O60858 407 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 SEC24DO94855 1032 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 ESRRBO95718 433 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 KRT6AP02538 564 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 GBAP04062 536 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 KRT6BP04259 564 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 PRB1P04280 392 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 UQCRHP07919 91 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 NR1D1P20393 614 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 MAOAP21397 527 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 HIST1H1TP22492 207 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 ATP5A1P25705 553 aaKnown RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 ITGA3P26006 1051 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 PTX3P26022 381 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 KRT6CP48668 564 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 LIM2P55344 173 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 DNAJB13P59910 316 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 BTG2P78543 158 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 ASPHQ12797 758 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 RUNX2Q13950 521 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 NSDHLQ15738 373 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 DEPDC1Q5TB30 811 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 MED25Q71SY5 747 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 CLNKQ7Z7G1 428 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 EXD3Q8N9H8 876 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 ACOT4Q8N9L9 421 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 METTL6Q8TCB7 284 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms