RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 LTB4R2Q9NPC1 389 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 GIMAP4Q9NUV9 329 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 CUEDC1Q9NWM3 386 aaPredicted RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 NDUFA13Q9P0J0 144 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 IFT80Q9P2H3 777 aaPredicted RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 ZNF624Q9P2J8 865 aaPredicted RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 PADI4Q9UM07 663 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 FAF1Q9UNN5 650 aaPredicted RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 EXO1Q9UQ84 846 aaKnown RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 IGHV1OR15-9A0A0B4J2B8 117 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 IGKV1-8A0A0C4DH67 115 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 OR2A25A4D2G3 310 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 TMEM247A6NEH6 219 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 METTL12A8MUP2 240 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 GNGT2O14610 69 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 PDPK1O15530 556 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 ZSCAN9O15535 394 aaPredicted RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 NOBOXO60393 691 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 GSNP06396 782 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 LYNP07948 512 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 IFI6P09912 130 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 FAM58BPP0C7Q3 252 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 SLC35G6P0C7Q6 338 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 THEGLP0DJG4 465 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 CTSEP14091 401 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 ITGA2P17301 1181 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 HIST1H1TP22492 207 aaPredicted RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 CDKN2CP42773 168 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 SSR2P43308 183 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 RPS9P46781 194 aaKnown RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 PRIM2P49643 509 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 UBE2IP63279 158 aaKnown RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 PLIN5Q00G26 463 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 GNA13Q14344 377 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 PLCL1Q15111 1095 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 ELOCQ15369 112 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 GTDC1Q4AE62 458 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 GCNT6Q5T4J0 391 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 ADNP2Q6IQ32 1131 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 ABHD17CQ6PCB6 329 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 SLC30A9Q6PML9 568 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 TMEM64Q6YI46 380 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 CBLL1Q75N03 491 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 RD3Q7Z3Z2 195 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 PIWIL3Q7Z3Z3 882 aaKnown RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 AMIGO2Q86SJ2 522 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 PATL1Q86TB9 770 aaKnown RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 PAQR7Q86WK9 346 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.56□□□□□ -1.2
VMA21-203ENST00000477649 ADGRF3Q8IZF5 1079 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 CLECL1Q8IZS7 167 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 GALNT4Q8N4A0 578 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 C2orf73Q8N5S3 287 aaPredicted RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 CAMKVQ8NCB2 501 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 OR13H1Q8NG92 308 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 OR4E2Q8NGC2 313 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 TSACCQ96A04 125 aaPredicted RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 GAL3ST3Q96A11 431 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 MS4A6EQ96DS6 147 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 NEURL3Q96EH8 262 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 SPACA7Q96KW9 195 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 F2RL3Q96RI0 385 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 SEPHS2Q99611 448 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 CIB1Q99828 191 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 MYOCQ99972 504 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 DPH2Q9BQC3 489 aaPredicted RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 SLC35A5Q9BS91 424 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 GPR174Q9BXC1 333 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 YTHDF1Q9BYJ9 559 aaKnown RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 ANKRD60Q9BZ19 345 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 SLC6A16Q9GZN6 736 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 FAM192AQ9GZU8 254 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 ABCG4Q9H172 646 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 CHST8Q9H2A9 424 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 SEMA6AQ9H2E6 1030 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 PIF1Q9H611 641 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 XKR8Q9H6D3 395 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 C6orf106Q9H6K1 298 aaPredicted RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 ZNF696Q9H7X3 374 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 TM9SF3Q9HD45 589 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 SLC6A20Q9NP91 592 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 IL1RAPQ9NPH3 570 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 SEMA3GQ9NS98 782 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 MS4A12Q9NXJ0 267 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 SMPD3Q9NY59 655 aaPredicted RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 USE1Q9NZ43 259 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 SCHIP1Q9P0W5 487 aaPredicted RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 TAAR2Q9P1P5 351 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 GMPR2Q9P2T1 348 aaKnown RBP7.56□□□□□ -1.2
VMA21-203ENST00000477649 CPNE7Q9UBL6 633 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 PHF11Q9UIL8 331 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 CYP8B1Q9UNU6 501 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 ANGPT4Q9Y264 503 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 BTBD3Q9Y2F9 522 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 PLEKHM1Q9Y4G2 1056 aa7.56□□□□□ -1.2
VMA21-203ENST00000477649 F5P12259 2224 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 FAM170BA6NMN3 283 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 G3V2T6 193 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 ACOX3O15254 700 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms