RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 NME2P1O60361 137 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 CTSVO60911 334 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 EIF2S1P05198 315 aaKnown RBP9.73□□□□□ -0.85
TRAIP-206ENST00000477546 GSTA2P09210 222 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 HIST1H2AGP0C0S8 130 aaPredicted RBP9.73□□□□□ -0.85
TRAIP-206ENST00000477546 EPXP11678 715 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 HIST1H2ADP20671 130 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 NME2P22392 152 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 TACR1P25103 407 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 STX2P32856 288 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 MAGEA4P43358 317 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 VSX2P58304 361 aaPredicted RBP9.73□□□□□ -0.85
TRAIP-206ENST00000477546 GPX6P59796 221 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 TAP2Q03519 686 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 MAPKAPK3Q16644 382 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 PHKG1Q16816 387 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 MEP1AQ16819 746 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 FAM214AQ32MH5 1076 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 PRMT9Q6P2P2 845 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 C3orf62Q6ZUJ4 267 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 RNF44Q7L0R7 432 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 WDR53Q7Z5U6 358 aaPredicted RBP9.73□□□□□ -0.85
TRAIP-206ENST00000477546 MMGT1Q8N4V1 131 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 AMER2Q8N7J2 671 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 TTC29Q8NA56 475 aaPredicted RBP9.73□□□□□ -0.85
TRAIP-206ENST00000477546 NOA1Q8NC60 698 aaKnown RBP9.73□□□□□ -0.85
TRAIP-206ENST00000477546 ZUFSPQ96AP4 578 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 ALKBH8Q96BT7 664 aaKnown RBP9.73□□□□□ -0.85
TRAIP-206ENST00000477546 HIST1H2AHQ96KK5 128 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 CCDC138Q96M89 665 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 ZNF285Q96NJ3 590 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 CPNE1Q99829 537 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 HIST1H2AJQ99878 128 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 ZFYVE21Q9BQ24 234 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 TTYH2Q9BSA4 534 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 H2AFJQ9BTM1 129 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 TRIM54Q9BYV2 358 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 ARL15Q9NXU5 204 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 UTP6Q9NYH9 597 aaKnown RBP9.73□□□□□ -0.85
TRAIP-206ENST00000477546 Q9UFV3 132 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 KLK4Q9Y5K2 254 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 HEATR5BQ9P2D3 2071 aa9.73□□□□□ -0.85
TRAIP-206ENST00000477546 PHF3Q92576 2039 aaKnown RBP9.72□□□□□ -0.85
TRAIP-206ENST00000477546 NPEPPSL1A6NEC2 478 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 FAM159BA6NKW6 160 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 CLCA1A8K7I4 914 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 SLC25A12O75746 678 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 CNOT4O95628 575 aaKnown RBP9.72□□□□□ -0.85
TRAIP-206ENST00000477546 GUCA1CO95843 209 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 GLI4P10075 376 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 EZRP15311 586 aaKnown RBP9.72□□□□□ -0.85
TRAIP-206ENST00000477546 ACVR2AP27037 513 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 GP5P40197 560 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 AP1S2P56377 157 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 TAS2R39P59534 338 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 OC90Q02509 493 aaPredicted RBP9.72□□□□□ -0.85
TRAIP-206ENST00000477546 PRDX1Q06830 199 aaKnown RBP9.72□□□□□ -0.85
TRAIP-206ENST00000477546 ILF2Q12905 390 aaKnown RBP9.72□□□□□ -0.85
TRAIP-206ENST00000477546 SLMAPQ14BN4 828 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 EFTUD2Q15029 972 aaKnown RBP eCLIP9.72□□□□□ -0.85
TRAIP-206ENST00000477546 KBTBD12Q3ZCT8 623 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 CMPK2Q5EBM0 449 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 PLAG1Q6DJT9 500 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 FRMPD2BQ6IN97 320 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 AGTRAPQ6RW13 159 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 NKAPQ8N5F7 415 aaKnown RBP9.72□□□□□ -0.85
TRAIP-206ENST00000477546 PPM1NQ8N819 430 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 FBF1Q8TES7 1133 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 PIGTQ969N2 578 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 TMEM125Q96AQ2 219 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 TSPAN17Q96FV3 270 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 RBBP8Q99708 897 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 PLCD4Q9BRC7 762 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 ATG10Q9H0Y0 220 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 CAB39LQ9H9S4 337 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 ZDHHC18Q9NUE0 388 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 C14orf105Q9NVL8 296 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 B4GALT7Q9UBV7 327 aa9.72□□□□□ -0.85
TRAIP-206ENST00000477546 MTRF1LQ9UGC7 380 aaKnown RBP9.72□□□□□ -0.85
TRAIP-206ENST00000477546 ANK3Q12955 4377 aaKnown RBP9.72□□□□□ -0.85
TRAIP-206ENST00000477546 LOC105369274A0A096LPK9 316 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 IGKV1-8A0A0C4DH67 115 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 LOC102723532A0A0G2JNH3 316 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 TUBAL3A6NHL2 446 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 FIGNL2A6NMB9 653 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 GABRR3A8MPY1 467 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 HAT1O14929 419 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 HS6ST1O60243 411 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 SRPX2O60687 465 aaPredicted RBP9.71□□□□□ -0.86
TRAIP-206ENST00000477546 HEXBP07686 556 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 ENO2P09104 434 aaPredicted RBP9.71□□□□□ -0.86
TRAIP-206ENST00000477546 CCND1P24385 295 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 ST13P50502 369 aaKnown RBP9.71□□□□□ -0.86
TRAIP-206ENST00000477546 ABATP80404 500 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 POU4F1Q01851 419 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 NAE1Q13564 534 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 USP10Q14694 798 aaKnown RBP9.71□□□□□ -0.86
TRAIP-206ENST00000477546 BTBD16Q32M84 506 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 GXYLT1Q4G148 440 aa9.71□□□□□ -0.86
TRAIP-206ENST00000477546 WASHC2DQ5SRD0 308 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms