RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 P04436 131 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 GLI4P10075 376 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 TNNI3P19429 210 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 TPSB2P20231 275 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 PPP2R1BP30154 601 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 SOX3P41225 446 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 MAGEA5P43359 124 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 DLX5P56178 289 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 BTN3A2P78410 334 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 CCZ1BP86790 482 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 CCZ1P86791 482 aaPredicted RBP6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 LTBQ06643 244 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 DHX9Q08211 1270 aaKnown RBP6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 SP140Q13342 867 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 PWP1Q13610 501 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 KEAP1Q14145 624 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 TPSAB1Q15661 275 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 CCNG2Q16589 344 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 SKOR2Q2VWA4 1001 aaPredicted RBP6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 HSP90AA5PQ58FG0 334 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 C1orf185Q5T7R7 199 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 WLSQ5T9L3 541 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 NDUFAF5Q5TEU4 345 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 CYHR1Q6ZMK1 362 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 CA13Q8N1Q1 262 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 AFAP1L2Q8N4X5 818 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 FAM47BQ8NA70 645 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 APCDD1LQ8NCL9 501 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 NFAM1Q8NET5 270 aaPredicted RBP6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 CALML6Q8TD86 181 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 UTP15Q8TED0 518 aaKnown RBP6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 SLC5A11Q8WWX8 675 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 NEIL2Q969S2 332 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 LRRC46Q96FV0 321 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 SNF8Q96H20 258 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 SMR3AQ99954 134 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 AARSD1Q9BTE6 412 aaKnown RBP6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 CNPPD1Q9BV87 410 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 CXXC4Q9H2H0 198 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 SPNS1Q9H2V7 528 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 KLHL31Q9H511 634 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 TRIM45Q9H8W5 580 aaPredicted RBP6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 DMRT3Q9NQL9 472 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 PRTFDC1Q9NRG1 225 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 HOMER3Q9NSC5 361 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 DEPPQ9NTK1 212 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 ZNF358Q9NW07 568 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 CRIM1Q9NZV1 1036 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 ZFP69BQ9UJL9 534 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 FBXO5Q9UKT4 447 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 YARS2Q9Y2Z4 477 aaKnown RBP6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 L3MBTL1Q9Y468 752 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 MPDZO75970 2070 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 OR14I1A6ND48 311 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 SDR42E2A6NKP2 422 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 EIF3FO00303 357 aaPredicted RBP6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 CLDN4O14493 209 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 GPR37O15354 613 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 PROM1O43490 865 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 PRKNO60260 465 aaPredicted RBP6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 WDR1O75083 606 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 KRT14P02533 472 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 CELA3AP09093 270 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 NPPBP16860 134 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 BMP5P22003 454 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 TACR1P25103 407 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 ADH7P40394 386 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 DNASE1L1P49184 302 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 ZNF75DP51815 510 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 STXBP1P61764 594 aaKnown RBP6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 CDK16Q00536 496 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 SLC25A35Q3KQZ1 300 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 FLYWCH1Q4VC44 716 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 XKR6Q5GH73 641 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 ANKRD22Q5VYY1 191 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 DUPD1Q68J44 220 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 PAQR3Q6TCH7 311 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 HSDL2Q6YN16 418 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 RTL4Q6ZR62 310 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 RGS9BPQ6ZS82 235 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 TRILQ7L0X0 811 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 CDC20BQ86Y33 519 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 LIX1LQ8IVB5 337 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 GPALPP1Q8IXQ4 340 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 VWA5B2Q8N398 1253 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 LIX1Q8N485 282 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 FAM109AQ8N4B1 249 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 TMEM251Q8N6I4 163 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 GPATCH11Q8N954 259 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 LRRN4CLQ8ND94 238 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 TRPV3Q8NET8 790 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 GABPB2Q8TAK5 448 aaPredicted RBP6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 NT5CQ8TCD5 201 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 MAIP1Q8WWC4 291 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 ATL1Q8WXF7 558 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 SARAFQ96BY9 339 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 JSRP1Q96MG2 331 aaPredicted RBP6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 RUNDC3BQ96NL0 473 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 RASL10BQ96S79 203 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 EGFL8Q99944 293 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms