RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 TUBB4AP04350 444 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 SERPIND1P05546 499 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 PTMAP06454 111 aaKnown RBP9.04□□□□□ -0.96
COL4A5-204ENST00000477429 TPM1P09493 284 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 INHBBP09529 407 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 UQCRC1P31930 480 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 CETN2P41208 172 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 SLC1A2P43004 574 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 NPY2RP49146 381 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 DNASE1L1P49184 302 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 PLGLB1Q02325 96 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 C1orf185Q5T7R7 199 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 ANKRD22Q5VYY1 191 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 DESI1Q6ICB0 168 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 KIAA0930Q6ICG6 404 aaPredicted RBP9.04□□□□□ -0.96
COL4A5-204ENST00000477429 MRNIPQ6NTE8 343 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 NEPROQ6NW34 567 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 ADGRD1Q6QNK2 874 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 CLEC9AQ6UXN8 241 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 SDCCAG8Q86SQ7 713 aaPredicted RBP9.04□□□□□ -0.96
COL4A5-204ENST00000477429 CAND1Q86VP6 1230 aaKnown RBP9.04□□□□□ -0.96
COL4A5-204ENST00000477429 RETREG3Q86VR2 466 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 C17orf64Q86WR6 236 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 SCUBE1Q8IWY4 988 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 CCDC170Q8IYT3 715 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 TMEM156Q8N614 296 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 ABHD11Q8NFV4 315 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 NT5CQ8TCD5 201 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 EEF1AKMT1Q8WVE0 214 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 SCYL1Q96KG9 808 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 RASL10BQ96S79 203 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 TCF12Q99081 682 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 SLC6A16Q9GZN6 736 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 IL22Q9GZX6 179 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 PRDM9Q9NQV7 894 aa9.04□□□□□ -0.96
COL4A5-204ENST00000477429 EIF2B3Q9NR50 452 aaKnown RBP9.04□□□□□ -0.96
COL4A5-204ENST00000477429 PNO1Q9NRX1 252 aaKnown RBP9.04□□□□□ -0.96
COL4A5-204ENST00000477429 TUBA8Q9NY65 449 aaPredicted RBP9.04□□□□□ -0.96
COL4A5-204ENST00000477429 PPIEQ9UNP9 301 aaKnown RBP9.04□□□□□ -0.96
COL4A5-204ENST00000477429 MPDZO75970 2070 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 ZCWPW2A0A1B0GU75 182 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 H3BMM5 538 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 SYT5O00445 386 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 ZBTB14O43829 449 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 ZNF189O75820 626 aaPredicted RBP9.03□□□□□ -0.96
COL4A5-204ENST00000477429 HAUS5O94927 633 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 TBX6O95947 436 aaPredicted RBP9.03□□□□□ -0.96
COL4A5-204ENST00000477429 CCL3P10147 92 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 CD53P19397 219 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 OGNP20774 298 aaKnown RBP9.03□□□□□ -0.96
COL4A5-204ENST00000477429 IL10P22301 178 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 HRH2P25021 359 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 TACR1P25103 407 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 PCSK6P29122 969 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 KCNJ1P48048 391 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 SSR4P51571 173 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 CLCN2P51788 898 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 BASP1P80723 227 aaKnown RBP9.03□□□□□ -0.96
COL4A5-204ENST00000477429 HERC3Q15034 1050 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 FLYWCH1Q4VC44 716 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 MEI1Q5TIA1 1274 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 ZNF470Q6ECI4 717 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 UGT3A1Q6NUS8 523 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 LCTLQ6UWM7 567 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 CXorf67Q86X51 503 aaPredicted RBP9.03□□□□□ -0.96
COL4A5-204ENST00000477429 SLC13A5Q86YT5 568 aaPredicted RBP9.03□□□□□ -0.96
COL4A5-204ENST00000477429 TNIP2Q8NFZ5 429 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 LINC01560Q8TB33 94 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 CREB3L4Q8TEY5 395 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 NEIL2Q969S2 332 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 CSF3RQ99062 836 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 NDNQ99608 321 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 SARGQ9BW04 601 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 PROK2Q9HC23 129 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 TIMMDC1Q9NPL8 285 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 ALKBH4Q9NXW9 302 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 PAK5Q9P286 719 aa9.03□□□□□ -0.96
COL4A5-204ENST00000477429 TRBC2A0A5B9 178 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 CDK2AP1O14519 115 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 AQP7O14520 342 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 RAF1P04049 648 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 HEXAP06865 529 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 SLC35G6P0C7Q6 338 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 JAK1P23458 1154 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 GABRB3P28472 473 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 ADSLP30566 484 aaPredicted RBP9.02□□□□□ -0.97
COL4A5-204ENST00000477429 CYLC1P35663 651 aaPredicted RBP9.02□□□□□ -0.97
COL4A5-204ENST00000477429 PIGAP37287 484 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 SCTRP47872 440 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 AGFG1P52594 562 aaKnown RBP9.02□□□□□ -0.97
COL4A5-204ENST00000477429 CDKN2DP55273 166 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 DHX9Q08211 1270 aaKnown RBP9.02□□□□□ -0.97
COL4A5-204ENST00000477429 DAZAP2Q15038 168 aaPredicted RBP9.02□□□□□ -0.97
COL4A5-204ENST00000477429 POU4F3Q15319 338 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 SLC25A35Q3KQZ1 300 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 RNF187Q5TA31 235 aaPredicted RBP9.02□□□□□ -0.97
COL4A5-204ENST00000477429 ADNP2Q6IQ32 1131 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 CLNKQ7Z7G1 428 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 UBL4BQ8N7F7 174 aa9.02□□□□□ -0.97
COL4A5-204ENST00000477429 OR56A3Q8NH54 315 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms