RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.12□□□□□ -0.15
SMG5-204ENST00000476954 ZNF839A8K0R7 811 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 AHRRA9YTQ3 701 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 CATP04040 527 aaKnown RBP14.11□□□□□ -0.15
SMG5-204ENST00000476954 SLC35G6P0C7Q6 338 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 ZNF888P0CJ79 500 aaPredicted RBP14.11□□□□□ -0.15
SMG5-204ENST00000476954 RPS3P23396 243 aaKnown RBP eCLIP14.11□□□□□ -0.15
SMG5-204ENST00000476954 IMPA1P29218 277 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 FMO4P31512 558 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 HK2P52789 917 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 CHRFAM7AQ494W8 412 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 AARS2Q5JTZ9 985 aaKnown RBP14.11□□□□□ -0.15
SMG5-204ENST00000476954 RNF187Q5TA31 235 aaPredicted RBP14.11□□□□□ -0.15
SMG5-204ENST00000476954 ADGRD1Q6QNK2 874 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 RHOT2Q8IXI1 618 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 FAM71DQ8N9W8 422 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 MFSD9Q8NBP5 474 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 BIRC8Q96P09 236 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 SPTLC3Q9NUV7 552 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 TESMINQ9Y4I5 508 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 CLDN16Q9Y5I7 305 aa14.11□□□□□ -0.15
SMG5-204ENST00000476954 C15orf38-AP3S2A0A0A6YYH1 394 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 LRRC3CA6NJW4 275 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 NDUFS4O43181 175 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 CEP104O60308 925 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 P04436 131 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 GYPCP04921 128 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 ATP5DP30049 168 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 TTPAP49638 278 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 CRYZQ08257 329 aaKnown RBP14.1□□□□□ -0.15
SMG5-204ENST00000476954 NSUN5P2Q63ZY6 315 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 REXO1L1PQ8IX06 675 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 ZNF321PQ8N8H1 164 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 IGFBPL1Q8WX77 278 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 HSPBAP1Q96EW2 488 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 TRIB1Q96RU8 372 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 TIMP4Q99727 224 aa14.1□□□□□ -0.15
SMG5-204ENST00000476954 MED12LQ86YW9 2145 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 MYOCOSA0A1B0GUC4 107 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 CTAGE15A4D2H0 777 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 CTIFO43310 598 aaKnown RBP14.09□□□□□ -0.15
SMG5-204ENST00000476954 NDUFS3O75489 264 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 SERPIND1P05546 499 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 OPRM1P35372 400 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 HNF4AP41235 474 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 GDF10P55107 478 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 RAB8AP61006 207 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 TBPL1P62380 186 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 CDH17Q12864 832 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 DUSP8Q13202 625 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 TERF2Q15554 542 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 PRAMEF20Q5VT98 475 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 CTAGE6Q86UF2 777 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 LIX1Q8N485 282 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 C9orf106Q8NAJ2 232 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 GOLM1Q8NBJ4 401 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 SLC30A3Q99726 388 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 KLHL28Q9NXS3 571 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 RIMKLBQ9ULI2 386 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 TCAF1Q9Y4C2 921 aa14.09□□□□□ -0.15
SMG5-204ENST00000476954 MBD3L3A6NE82 208 aaPredicted RBP14.08□□□□□ -0.16
SMG5-204ENST00000476954 C4orf51C9J302 202 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 PJA2O43164 708 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 TLX2O43763 284 aaPredicted RBP14.08□□□□□ -0.16
SMG5-204ENST00000476954 CD5LO43866 347 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 LRATO95237 230 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 SIX3O95343 332 aaPredicted RBP14.08□□□□□ -0.16
SMG5-204ENST00000476954 SERPINC1P01008 464 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 TP53P04637 393 aaPredicted RBP14.08□□□□□ -0.16
SMG5-204ENST00000476954 CDH1P12830 882 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 RNH1P13489 461 aaKnown RBP14.08□□□□□ -0.16
SMG5-204ENST00000476954 HRH2P25021 359 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 ADRA1DP25100 572 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 CPA2P48052 419 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 HNRNPFP52597 415 aaKnown RBP14.08□□□□□ -0.16
SMG5-204ENST00000476954 RPS6KA1Q15418 735 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 AADACL2Q6P093 401 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 C20orf204Q6ZNR8 217 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 LRRC6Q86X45 466 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMG5-204ENST00000476954 LRRC25Q8N386 305 aaPredicted RBP14.08□□□□□ -0.16
SMG5-204ENST00000476954 MEIOBQ8N635 442 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 TMEM52Q8NDY8 209 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 MBD3L2Q8NHZ7 208 aaPredicted RBP14.08□□□□□ -0.16
SMG5-204ENST00000476954 UTP15Q8TED0 518 aaKnown RBP14.08□□□□□ -0.16
SMG5-204ENST00000476954 WFIKKN1Q96NZ8 548 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 PROK2Q9HC23 129 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 ACKR4Q9NPB9 350 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 CCDC177Q9NQR7 707 aaPredicted RBP14.08□□□□□ -0.16
SMG5-204ENST00000476954 CAMK2AQ9UQM7 478 aa14.08□□□□□ -0.16
SMG5-204ENST00000476954 PSMD12O00232 456 aaPredicted RBP14.07□□□□□ -0.16
SMG5-204ENST00000476954 FAM157CP0CG43 387 aa14.07□□□□□ -0.16
SMG5-204ENST00000476954 TMIGD3P0DMS9 266 aaPredicted RBP14.07□□□□□ -0.16
SMG5-204ENST00000476954 CHRM3P20309 590 aa14.07□□□□□ -0.16
SMG5-204ENST00000476954 SOX18P35713 384 aa14.07□□□□□ -0.16
SMG5-204ENST00000476954 ATP5J2P56134 94 aa14.07□□□□□ -0.16
SMG5-204ENST00000476954 CUL1Q13616 776 aa14.07□□□□□ -0.16
SMG5-204ENST00000476954 BMPR2Q13873 1038 aa14.07□□□□□ -0.16
SMG5-204ENST00000476954 VEZF1Q14119 521 aa14.07□□□□□ -0.16
SMG5-204ENST00000476954 DCST1Q5T197 706 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms