RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ABHD13Q7L211 337 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 STRA8Q7Z7C7 330 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 CPNE9Q8IYJ1 553 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 RELL2Q8NC24 303 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-213ENST00000476777 NT5CQ8TCD5 201 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 UTP15Q8TED0 518 aaKnown RBP10.54□□□□□ -0.72
BRCA1-213ENST00000476777 NUDT8Q8WV74 236 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 ASB15Q8WXK1 588 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 ALKBH8Q96BT7 664 aaKnown RBP10.54□□□□□ -0.72
BRCA1-213ENST00000476777 PDLIM2Q96JY6 352 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 GPR21Q99679 349 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 FRMD8P1Q9BZ68 369 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-213ENST00000476777 PLEKHF2Q9H8W4 249 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 LIN28AQ9H9Z2 209 aaKnown RBP10.54□□□□□ -0.72
BRCA1-213ENST00000476777 IL1RL2Q9HB29 575 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 NEUROD4Q9HD90 331 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 PNO1Q9NRX1 252 aaKnown RBP10.54□□□□□ -0.72
BRCA1-213ENST00000476777 INTS10Q9NVR2 710 aaKnown RBP10.54□□□□□ -0.72
BRCA1-213ENST00000476777 ALKBH4Q9NXW9 302 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 ADAMTS6Q9UKP5 1117 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 PDE10AQ9Y233 779 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 MMACHCQ9Y4U1 282 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 CLDN16Q9Y5I7 305 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 EPN1Q9Y6I3 576 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-213ENST00000476777 ATP6AP2A0A1C7CYW4 349 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 TRBC2A0A5B9 178 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 CTAGE15A4D2H0 777 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 PSMD12O00232 456 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-213ENST00000476777 ATP6AP2O75787 350 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 LY6G6DO95868 133 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 FTCDO95954 541 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 SERPIND1P05546 499 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 ENDOUP21128 410 aaKnown RBP10.53□□□□□ -0.72
BRCA1-213ENST00000476777 CNR1P21554 472 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 CCND1P24385 295 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 PPP2R1BP30154 601 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 SOX3P41225 446 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 MAN2A2P49641 1150 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 RAB8AP61006 207 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 RGS1Q08116 209 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 SNX1Q13596 522 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 HYAL4Q2M3T9 481 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 ZNF750Q32MQ0 723 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 FBXL19-AS1Q494R0 122 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 WLSQ5T9L3 541 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 ZNF470Q6ECI4 717 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 SEM1Q6ZVN7 128 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 CTAGE6Q86UF2 777 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 SCUBE1Q8IWY4 988 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 RNASE6Q93091 150 aaKnown RBP10.53□□□□□ -0.72
BRCA1-213ENST00000476777 SARAFQ96BY9 339 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 HES6Q96HZ4 224 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 RASL10BQ96S79 203 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 FAM173AQ9BQD7 235 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 CCDC77Q9BR77 488 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 HAUS8Q9BT25 410 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 AARSD1Q9BTE6 412 aaKnown RBP10.53□□□□□ -0.72
BRCA1-213ENST00000476777 SPNS1Q9H2V7 528 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 RHBGQ9H310 441 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 ZNF395Q9H8N7 513 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-213ENST00000476777 MYOTQ9UBF9 498 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 ZFP69BQ9UJL9 534 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 MED12Q93074 2177 aa10.53□□□□□ -0.72
BRCA1-213ENST00000476777 CTAGE9A4FU28 777 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 HSPB2A8KAH6 182 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 FAM171A2A8MVW0 826 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 C4orf51C9J302 202 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 TGFBR3LH3BV60 316 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 EIF3FO00303 357 aaPredicted RBP10.52□□□□□ -0.73
BRCA1-213ENST00000476777 HCN1O60741 890 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 SMIM10L1P0DMW3 83 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 EPXP11678 715 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 GABRA1P14867 456 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 CD53P19397 219 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 TACR1P25103 407 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 AHRP35869 848 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 ANP32AP39687 249 aaKnown RBP10.52□□□□□ -0.73
BRCA1-213ENST00000476777 HNF4AP41235 474 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 SCTRP47872 440 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 ASCL1P50553 236 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 DCAF7P61962 342 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 BASP1P80723 227 aaKnown RBP10.52□□□□□ -0.73
BRCA1-213ENST00000476777 CTBP1Q13363 440 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 SLC10A1Q14973 349 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 HSPB2Q16082 182 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 HECTD2Q5U5R9 776 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 CXXC5Q7LFL8 322 aaKnown RBP10.52□□□□□ -0.73
BRCA1-213ENST00000476777 DENND6AQ8IWF6 608 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 CA13Q8N1Q1 262 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 NAXEQ8NCW5 288 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 SNF8Q96H20 258 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 SMIM10Q96HG1 83 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 SCYL1Q96KG9 808 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 OR4K3Q96R72 315 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 CCDC68Q9H2F9 335 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 KLHL31Q9H511 634 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 LDAHQ9H6V9 325 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 PARVBQ9HBI1 364 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 FBXO6Q9NRD1 293 aaPredicted RBP10.52□□□□□ -0.73
BRCA1-213ENST00000476777 SAMD15Q9P1V8 674 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms