RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 RHBGQ9H310 441 aa15.22■□□□□ 0.03
COL1A1-205ENST00000476387 LANCL2Q9NS86 450 aa15.22■□□□□ 0.03
COL1A1-205ENST00000476387 OSGIN2Q9Y236 505 aa15.22■□□□□ 0.03
COL1A1-205ENST00000476387 IGHV3-20A0A0C4DH32 117 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 A0A0G2JN53 185 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 LRIT2A6NDA9 550 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 OR2W5A6NFC9 320 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 MAGEB17A8MXT2 336 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 C4orf51C9J302 202 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 RIPK2O43353 540 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 B3GALT2O43825 422 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 B4GALT2O60909 372 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 SNRPAP09012 282 aaKnown RBP15.21■□□□□ 0.03
COL1A1-205ENST00000476387 RBP1P09455 135 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 PCNAP12004 261 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 EPORP19235 508 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 CD22P20273 847 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 RHAGQ02094 409 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 ACTN3Q08043 901 aaPredicted RBP15.21■□□□□ 0.03
COL1A1-205ENST00000476387 BTBD16Q32M84 506 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 SFT2D3Q587I9 215 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 TEX35Q5T0J7 233 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 MED27Q6P2C8 311 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 MYLK4Q86YV6 388 aaPredicted RBP15.21■□□□□ 0.03
COL1A1-205ENST00000476387 PLD6Q8N2A8 252 aaKnown RBP15.21■□□□□ 0.03
COL1A1-205ENST00000476387 PLPP5Q8NEB5 264 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 OR2L5Q8NG80 312 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 SUN3Q8TAQ9 357 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 NR4A3Q92570 626 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 TSLPQ969D9 159 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 MS4A6EQ96DS6 147 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 MAGEB10Q96LZ2 347 aaPredicted RBP15.21■□□□□ 0.03
COL1A1-205ENST00000476387 GPR78Q96P69 363 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 TAAR6Q96RI8 345 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 AICDAQ9GZX7 198 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 STMN3Q9NZ72 180 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 ABI3Q9P2A4 366 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 TMCO1Q9UM00 188 aa15.21■□□□□ 0.03
COL1A1-205ENST00000476387 TNPO3Q9Y5L0 923 aaKnown RBP15.21■□□□□ 0.03
COL1A1-205ENST00000476387 CRYBG3Q68DQ2 2970 aa15.21■□□□□ 0.02
COL1A1-205ENST00000476387 CELSR2Q9HCU4 2923 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 MYO9AB2RTY4 2548 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 OR5H15A6NDH6 313 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 LRRTM2O43300 516 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 PRMT3O60678 531 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 PRAMEF2O60811 474 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 COL6A2P12110 1019 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 SERPINB1P30740 379 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 CASP2P42575 452 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 PIK3CGP48736 1102 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 TDGF1P3P51864 188 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 PLA2G16P53816 162 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 OR4D2P58180 307 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 ZNF33BQ06732 778 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 EXT1Q16394 746 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 ADPRMQ3LIE5 342 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 ADNP2Q6IQ32 1131 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 GRHL2Q6ISB3 625 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 H3F3CQ6NXT2 135 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 PAPD4Q6PIY7 484 aaKnown RBP15.2■□□□□ 0.02
COL1A1-205ENST00000476387 QSOX2Q6ZRP7 698 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 VN1R5Q7Z5H4 357 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 GSPT2Q8IYD1 628 aaKnown RBP15.2■□□□□ 0.02
COL1A1-205ENST00000476387 CA13Q8N1Q1 262 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 LRRN4CLQ8ND94 238 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 ARMC2Q8NEN0 867 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 DNAJB8Q8NHS0 232 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 M1APQ8TC57 530 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 ADAMTS18Q8TE60 1221 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 MTBPQ96DY7 904 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 PTCHD1Q96NR3 888 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 LPAR4Q99677 370 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 NPLQ9BXD5 320 aaPredicted RBP15.2■□□□□ 0.02
COL1A1-205ENST00000476387 ACTR8Q9H981 624 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 XPR1Q9UBH6 696 aa15.2■□□□□ 0.02
COL1A1-205ENST00000476387 ZNF490Q9ULM2 529 aaPredicted RBP15.2■□□□□ 0.02
COL1A1-205ENST00000476387 MRPS33Q9Y291 106 aaKnown RBP15.2■□□□□ 0.02
COL1A1-205ENST00000476387 CACNA1DQ01668 2161 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 A0A1B0GUH1 482 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 KLK8O60259 260 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 DNAJB6O75190 326 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 SMIM24O75264 130 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 CRYABP02511 175 aaKnown RBP15.19■□□□□ 0.02
COL1A1-205ENST00000476387 FAM153BP0C7A2 387 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 DCTP40126 519 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 ARL1P40616 181 aaPredicted RBP15.19■□□□□ 0.02
COL1A1-205ENST00000476387 GTF2H2Q13888 395 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 E2F2Q14209 437 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 RCN2Q14257 317 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 PCBP2Q15366 365 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL1A1-205ENST00000476387 FAM153CQ494X1 144 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 GTF2H2CQ6P1K8 395 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 METTL2BQ6P1Q9 378 aaKnown RBP15.19■□□□□ 0.02
COL1A1-205ENST00000476387 CNPY4Q8N129 248 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 PTGR2Q8N8N7 351 aaPredicted RBP15.19■□□□□ 0.02
COL1A1-205ENST00000476387 SRFBP1Q8NEF9 429 aaKnown RBP15.19■□□□□ 0.02
COL1A1-205ENST00000476387 ZNF354BQ96LW1 612 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 KCNC2Q96PR1 638 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 L2HGDHQ9H9P8 463 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 PRDM9Q9NQV7 894 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms