RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 B3GALT2O43825 422 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 SH3BGRLO75368 114 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 WDPCPO95876 746 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 UQCRHP07919 91 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 SNRPAP09012 282 aaKnown RBP19.85■□□□□ 0.77
LIME1-204ENST00000476183 RBP1P09455 135 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 MYBL2P10244 700 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 TSFMP43897 325 aaKnown RBP19.85■□□□□ 0.77
LIME1-204ENST00000476183 TNFSF10P50591 281 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 RAB38P57729 211 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 SLC26A5P58743 744 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 GTF2H2Q13888 395 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 EXT1Q16394 746 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 H3F3CQ6NXT2 135 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 GTF2H2CQ6P1K8 395 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 ZNF793Q6ZN11 406 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 GOLGA7Q7Z5G4 137 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 SCUBE1Q8IWY4 988 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 PTGR2Q8N8N7 351 aaPredicted RBP19.85■□□□□ 0.77
LIME1-204ENST00000476183 UBE2E3Q969T4 207 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 SERINC2Q96SA4 455 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 CSF3RQ99062 836 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 NPAS2Q99743 824 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 ANGPTL3Q9Y5C1 460 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 COPG1Q9Y678 874 aaKnown RBP19.85■□□□□ 0.77
LIME1-204ENST00000476183 SVILO95425 2214 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 A0A088AWK7 358 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 DYTNA2CJ06 578 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 TGFBR3LH3BV60 316 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 RTCAO00442 366 aaKnown RBP19.84■□□□□ 0.77
LIME1-204ENST00000476183 MAN1A2O60476 641 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 TGFB1P01137 390 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 COL6A2P12110 1019 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 ZNF10P21506 573 aaPredicted RBP19.84■□□□□ 0.77
LIME1-204ENST00000476183 HPDP32754 393 aaPredicted RBP19.84■□□□□ 0.77
LIME1-204ENST00000476183 MTTPP55157 894 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 LIM2P55344 173 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 ZNF33BQ06732 778 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 MRPL49Q13405 166 aaKnown RBP19.84■□□□□ 0.77
LIME1-204ENST00000476183 ADGRD1Q6QNK2 874 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 CYP4X1Q8N118 509 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 FAM47BQ8NA70 645 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 OR1N1Q8NGS0 311 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 PHF21BQ96EK2 531 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 SCYL1Q96KG9 808 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 KCNK13Q9HB14 408 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 STMN3Q9NZ72 180 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 DAPP1Q9UN19 280 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 MMACHCQ9Y4U1 282 aa19.84■□□□□ 0.77
LIME1-204ENST00000476183 TNPO3Q9Y5L0 923 aaKnown RBP19.84■□□□□ 0.77
LIME1-204ENST00000476183 A8MUA0 341 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 CYR61O00622 381 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 SBK3P0C264 359 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 EEF1DP29692 281 aaKnown RBP19.83■□□□□ 0.77
LIME1-204ENST00000476183 DDX39BQ13838 428 aaKnown RBP19.83■□□□□ 0.77
LIME1-204ENST00000476183 SLC29A2Q14542 456 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 TSNAXIP1Q2TAA8 658 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 ABHD17BQ5VST6 288 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 LIPJQ5W064 366 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 TIFABQ6ZNK6 161 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 MYLK4Q86YV6 388 aaPredicted RBP19.83■□□□□ 0.77
LIME1-204ENST00000476183 TMEM151AQ8N4L1 468 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 KIF2BQ8N4N8 673 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 NFAM1Q8NET5 270 aaPredicted RBP19.83■□□□□ 0.77
LIME1-204ENST00000476183 HUS1BQ8NHY5 278 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 KCNC2Q96PR1 638 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 RNF32Q9H0A6 362 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 OR51B5Q9H339 312 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 IPPKQ9H8X2 491 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 ACTR8Q9H981 624 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 COPS7BQ9H9Q2 264 aaPredicted RBP19.83■□□□□ 0.77
LIME1-204ENST00000476183 KCMF1Q9P0J7 381 aa19.83■□□□□ 0.77
LIME1-204ENST00000476183 SPTAN1Q13813 2472 aaKnown RBP19.82■□□□□ 0.76
LIME1-204ENST00000476183 POLEQ07864 2286 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 USP9YO00507 2555 aaPredicted RBP19.82■□□□□ 0.76
LIME1-204ENST00000476183 SAGE2PA6NJ88 616 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 SAP18O00422 153 aaKnown RBP19.82■□□□□ 0.76
LIME1-204ENST00000476183 OR7A17O14581 309 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 ATP5A1P25705 553 aaKnown RBP19.82■□□□□ 0.76
LIME1-204ENST00000476183 SERPINB1P30740 379 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 ST13P50502 369 aaKnown RBP19.82■□□□□ 0.76
LIME1-204ENST00000476183 TGM3Q08188 693 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 UBAP2LQ14157 1087 aaKnown RBP19.82■□□□□ 0.76
LIME1-204ENST00000476183 NR6A1Q15406 480 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 ACER2Q5QJU3 275 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 METTL2BQ6P1Q9 378 aaKnown RBP19.82■□□□□ 0.76
LIME1-204ENST00000476183 CRLF3Q8IUI8 442 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 BEST3Q8N1M1 668 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 ELP5Q8TE02 316 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 CMTM7Q96FZ5 175 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 NSUN5Q96P11 429 aaKnown RBP19.82■□□□□ 0.76
LIME1-204ENST00000476183 MTERF1Q99551 399 aaKnown RBP19.82■□□□□ 0.76
LIME1-204ENST00000476183 TBCDQ9BTW9 1192 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 SORBS1Q9BX66 1292 aaKnown RBP19.82■□□□□ 0.76
LIME1-204ENST00000476183 SLC29A3Q9BZD2 475 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 DMRT3Q9NQL9 472 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 PRTFDC1Q9NRG1 225 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 TEKT2Q9UIF3 430 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 RNF11Q9Y3C5 154 aa19.82■□□□□ 0.76
LIME1-204ENST00000476183 TRAV17A0A0B4J275 112 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms