RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 HYAL2Q12891 473 aa14.59□□□□□ -0.07
SRRT-209ENST00000474896 CSHL1Q14406 222 aa14.59□□□□□ -0.07
SRRT-209ENST00000474896 RBM20Q5T481 1227 aaKnown RBP14.59□□□□□ -0.07
SRRT-209ENST00000474896 TMEM211Q6ICI0 200 aa14.59□□□□□ -0.07
SRRT-209ENST00000474896 WDR93Q6P2C0 686 aa14.59□□□□□ -0.07
SRRT-209ENST00000474896 STRA8Q7Z7C7 330 aa14.59□□□□□ -0.07
SRRT-209ENST00000474896 MARVELD2Q8N4S9 558 aa14.59□□□□□ -0.07
SRRT-209ENST00000474896 TRIM54Q9BYV2 358 aa14.59□□□□□ -0.07
SRRT-209ENST00000474896 SPNS1Q9H2V7 528 aa14.59□□□□□ -0.07
SRRT-209ENST00000474896 KLHL31Q9H511 634 aa14.59□□□□□ -0.07
SRRT-209ENST00000474896 CLK4Q9HAZ1 481 aaKnown RBP14.59□□□□□ -0.07
SRRT-209ENST00000474896 PRDM9Q9NQV7 894 aa14.59□□□□□ -0.07
SRRT-209ENST00000474896 ZFATQ9P243 1243 aa14.59□□□□□ -0.07
SRRT-209ENST00000474896 IGKV3D-11A0A0A0MRZ8 115 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 TCRBV16S1A1N1A0A5B0 115 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 PABPN1LA6NDY0 278 aaKnown RBP14.58□□□□□ -0.08
SRRT-209ENST00000474896 PSMD12O00232 456 aaPredicted RBP14.58□□□□□ -0.08
SRRT-209ENST00000474896 GUCA1CO95843 209 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 AHSGP02765 367 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 FAM153BP0C7A2 387 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 RNH1P13489 461 aaKnown RBP14.58□□□□□ -0.08
SRRT-209ENST00000474896 AHRP35869 848 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 PGGT1BP53609 377 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 IL2P60568 153 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 FAM153CQ494X1 144 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 CMPK2Q5EBM0 449 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 CAPN12Q6ZSI9 719 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 RELL1Q8IUW5 271 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 ARMC10Q8N2F6 343 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 TMEM156Q8N614 296 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 ARMC2Q8NEN0 867 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 LILRB4Q8NHJ6 448 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 C16orf52Q8NHV5 167 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 ASB5Q8WWX0 329 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 SLC5A11Q8WWX8 675 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 NEIL2Q969S2 332 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 FBXL8Q96CD0 374 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 CERS2Q96G23 380 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 UCK2Q9BZX2 261 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 FBXW2Q9UKT8 454 aa14.58□□□□□ -0.08
SRRT-209ENST00000474896 INTS1Q8N201 2190 aaKnown RBP14.57□□□□□ -0.08
SRRT-209ENST00000474896 ZFHX3Q15911 3703 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 TRBV11-1A0A0K0K1C0 115 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 NKX2-6A6NCS4 301 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 URADA6NGE7 173 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 SMIM10L1P0DMW3 83 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 SSTR1P30872 391 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 CLCN2P51788 898 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 AP1S2P56377 157 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 GPR85P60893 370 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 FRG1Q14331 258 aaKnown RBP14.57□□□□□ -0.08
SRRT-209ENST00000474896 SLMAPQ14BN4 828 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 RBBP5Q15291 538 aaKnown RBP14.57□□□□□ -0.08
SRRT-209ENST00000474896 TRMT10BQ6PF06 316 aaKnown RBP14.57□□□□□ -0.08
SRRT-209ENST00000474896 MDGA2Q7Z553 956 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 ANKRD53Q8N9V6 530 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 APCDD1LQ8NCL9 501 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 OR52N2Q8NGI0 321 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 GABPB2Q8TAK5 448 aaPredicted RBP14.57□□□□□ -0.08
SRRT-209ENST00000474896 ATL1Q8WXF7 558 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.57□□□□□ -0.084e-7■■■■■ 58.1
SRRT-209ENST00000474896 RND1Q92730 232 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 SMIM10Q96HG1 83 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 TSNARE1Q96NA8 513 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 SLC6A16Q9GZN6 736 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 DEFB127Q9H1M4 99 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 CDC42EP4Q9H3Q1 356 aaKnown RBP14.57□□□□□ -0.08
SRRT-209ENST00000474896 PNO1Q9NRX1 252 aaKnown RBP14.57□□□□□ -0.08
SRRT-209ENST00000474896 NINJ2Q9NZG7 142 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 RNF6Q9Y252 685 aa14.57□□□□□ -0.08
SRRT-209ENST00000474896 SPG11Q96JI7 2443 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 HCFC1P51610 2035 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 FAM90A27PA6NNH2 459 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 ITGA10O75578 1167 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 MYO1DO94832 1006 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 GSTA2P09210 222 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 GPX6P59796 221 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 PMPCAQ10713 525 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 PDAP1Q13442 181 aaKnown RBP14.56□□□□□ -0.08
SRRT-209ENST00000474896 C3orf62Q6ZUJ4 267 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 CYP4Z2PQ8N1L4 340 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 CA13Q8N1Q1 262 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 ZFP62Q8NB50 900 aaPredicted RBP14.56□□□□□ -0.08
SRRT-209ENST00000474896 TRPV3Q8NET8 790 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 B3GNT7Q8NFL0 401 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 PARD6BQ9BYG5 372 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 TP63Q9H3D4 680 aaPredicted RBP14.56□□□□□ -0.08
SRRT-209ENST00000474896 KCNJ16Q9NPI9 418 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 NPDC1Q9NQX5 325 aaPredicted RBP14.56□□□□□ -0.08
SRRT-209ENST00000474896 DYRK1BQ9Y463 629 aa14.56□□□□□ -0.08
SRRT-209ENST00000474896 FOXO6A8MYZ6 492 aa14.55□□□□□ -0.08
SRRT-209ENST00000474896 TOXO94900 526 aa14.55□□□□□ -0.08
SRRT-209ENST00000474896 IGFBP2P18065 325 aa14.55□□□□□ -0.08
SRRT-209ENST00000474896 CHRNB4P30926 498 aa14.55□□□□□ -0.08
SRRT-209ENST00000474896 NR0B1P51843 470 aaKnown RBP14.55□□□□□ -0.08
SRRT-209ENST00000474896 BTN3A2P78410 334 aa14.55□□□□□ -0.08
SRRT-209ENST00000474896 REEP5Q00765 189 aa14.55□□□□□ -0.08
SRRT-209ENST00000474896 TOR1AIP1Q5JTV8 583 aa14.55□□□□□ -0.08
SRRT-209ENST00000474896 ARHGAP11AQ6P4F7 1023 aa14.55□□□□□ -0.08
SRRT-209ENST00000474896 NXPE4Q6UWF7 544 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms