RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 HIST2H2AA3Q6FI13 130 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 SCUBE1Q8IWY4 988 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 ARMC10Q8N2F6 343 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 B3GNT7Q8NFL0 401 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 WDR34Q96EX3 536 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 FRMD6Q96NE9 622 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 RUBCNLQ9H714 662 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 COPS7BQ9H9Q2 264 aaPredicted RBP19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 PRTFDC1Q9NRG1 225 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 RNF112Q9ULX5 631 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 KLF2Q9Y5W3 355 aaPredicted RBP19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 A8MUA0 341 aa19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 PRSS44E7EML9 344 aa19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 MYO1DO94832 1006 aa19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 STX2P32856 288 aa19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 HLCSP50747 726 aa19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 PLTPP55058 493 aa19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 SRSF11Q05519 484 aaKnown RBP19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 C2orf54Q08AI8 447 aa19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 RUNX2Q13950 521 aa19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 ZNF595Q8IYB9 648 aa19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 ZNF808Q8N4W9 903 aaPredicted RBP19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 SRFBP1Q8NEF9 429 aaKnown RBP19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 STAG3L4Q8TBR4 150 aa19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 ITLN2Q8WWU7 325 aaPredicted RBP19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 CCDC120Q96HB5 630 aa19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 SERINC2Q96SA4 455 aa19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 PTBP2Q9UKA9 531 aaKnown RBP19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 GTF3C1Q12789 2109 aa19.03■□□□□ 0.64
PDLIM4-206ENST00000474421 PCNX1Q96RV3 2341 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 A0A0G2JN53 185 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 NPIPA5E9PKD4 350 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 NME2P1O60361 137 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 NME2P22392 152 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 ST13P50502 369 aaKnown RBP19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 PLA2G16P53816 162 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 MTTPP55157 894 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 GPX6P59796 221 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 SLC13A2Q13183 592 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 NAB1Q13506 487 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 DOC2AQ14183 400 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 TBCCQ15814 346 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 ZNF468Q5VIY5 522 aaPredicted RBP19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 RAPH1Q70E73 1250 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 LRRC70Q7Z2Q7 622 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 LURAP1LQ8IV03 231 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 PPM1NQ8N819 430 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 POGLUT1Q8NBL1 392 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 APCDD1LQ8NCL9 501 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 UBE2E3Q969T4 207 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 VMP1Q96GC9 406 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 QRFPRQ96P65 431 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 CCDC77Q9BR77 488 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 ROGDIQ9GZN7 287 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 NMRAL1Q9HBL8 299 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 PNO1Q9NRX1 252 aaKnown RBP19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 NPIPA1Q9UND3 350 aa19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 PPIEQ9UNP9 301 aaKnown RBP19.02■□□□□ 0.64
PDLIM4-206ENST00000474421 MYO9AB2RTY4 2548 aa19.02■□□□□ 0.63
PDLIM4-206ENST00000474421 TRBV11-1A0A0K0K1C0 115 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 CCNT2O60583 730 aaKnown RBP19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 ESRRAP11474 423 aaPredicted RBP19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 CRABP2P29373 138 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 MAGEA4P43358 317 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 KCNC1P48547 511 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 ETF1P62495 437 aaKnown RBP19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 IRF8Q02556 426 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 EFTUD2Q15029 972 aaKnown RBP eCLIP19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 KBTBD12Q3ZCT8 623 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 SP5Q6BEB4 398 aaPredicted RBP19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 ABHD17CQ6PCB6 329 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 CCDC91Q7Z6B0 441 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 MRGPRGQ86SM5 289 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 TBC1D1Q86TI0 1168 aaPredicted RBP19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 CCDC25Q86WR0 208 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 TICAM1Q8IUC6 712 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 SPPL2CQ8IUH8 684 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 KCNC2Q96PR1 638 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 CD244Q9BZW8 370 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 ADAP2Q9NPF8 381 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 NUDT4Q9NZJ9 180 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 SH3BGRL2Q9UJC5 107 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 FBXW2Q9UKT8 454 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 ZNF490Q9ULM2 529 aaPredicted RBP19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 ZNF835Q9Y2P0 537 aa19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 KLF13Q9Y2Y9 288 aaPredicted RBP19.01■□□□□ 0.63
PDLIM4-206ENST00000474421 ASNA1O43681 348 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 C1QAP02745 245 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 ZNF24P17028 368 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 CASP2P42575 452 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 LIM2P55344 173 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 SLMAPQ14BN4 828 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 FBXO48Q5FWF7 155 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 XKRXQ6PP77 449 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 Q6ZPB1 254 aaPredicted RBP19■□□□□ 0.63
PDLIM4-206ENST00000474421 VN1R5Q7Z5H4 357 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 SIAH3Q8IW03 269 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 GHDCQ8N2G8 530 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 TMEM132CQ8N3T6 1108 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms