RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 MVB12AQ96EY5 273 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 SLC45A3Q96JT2 553 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 ZNF578Q96N58 590 aaPredicted RBP9.8□□□□□ -0.84
CASC3-204ENST00000474190 CSF3RQ99062 836 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 SERPINI1Q99574 410 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 SPSB2Q99619 263 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 MAPKAP1Q9BPZ7 522 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 TBCDQ9BTW9 1192 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 NDC1Q9BTX1 674 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 NUF2Q9BZD4 464 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 SLC26A1Q9H2B4 701 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 VPS29Q9UBQ0 182 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 SLC12A4Q9UP95 1085 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 SRPK3Q9UPE1 567 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 DLGAP4Q9Y2H0 992 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 FIS1Q9Y3D6 152 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 ATG4BQ9Y4P1 393 aa9.8□□□□□ -0.84
CASC3-204ENST00000474190 MDC1Q14676 2089 aaKnown RBP9.79□□□□□ -0.84
CASC3-204ENST00000474190 MGAQ8IWI9 3026 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 ATP6AP2A0A1C7CYW4 349 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 FAM227AF5H4B4 570 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 H0YIG0 161 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 HDAC3O15379 428 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 MAP3K7O43318 606 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 CHST10O43529 356 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 RAD1O60671 282 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 ATP6AP2O75787 350 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 UMODP07911 640 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 CD1EP15812 388 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 ALAS2P22557 587 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 CD82P27701 267 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 RBMS1P29558 406 aaKnown RBP9.79□□□□□ -0.84
CASC3-204ENST00000474190 SOX18P35713 384 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 ARL1P40616 181 aaPredicted RBP9.79□□□□□ -0.84
CASC3-204ENST00000474190 LIM2P55344 173 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 STXBP1P61764 594 aaKnown RBP9.79□□□□□ -0.84
CASC3-204ENST00000474190 SLC9A5Q14940 896 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 PDCD2Q16342 344 aaPredicted RBP9.79□□□□□ -0.84
CASC3-204ENST00000474190 SOWAHCQ53LP3 525 aaPredicted RBP9.79□□□□□ -0.84
CASC3-204ENST00000474190 C6orf136Q5SQH8 315 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 PRMT9Q6P2P2 845 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 EPGNQ6UW88 154 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 CHSY3Q70JA7 882 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 OVCH1Q7RTY7 1134 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 LAPTM4BQ86VI4 370 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 LRRC34Q8IZ02 419 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 TBC1D19Q8N5T2 526 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 ARFGAP2Q8N6H7 521 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 TTC29Q8NA56 475 aaPredicted RBP9.79□□□□□ -0.84
CASC3-204ENST00000474190 RFWD2Q8NHY2 731 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 PIWIL2Q8TC59 973 aaKnown RBP9.79□□□□□ -0.84
CASC3-204ENST00000474190 CCT6BQ92526 530 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 N4BP2L2Q92802 583 aaPredicted RBP9.79□□□□□ -0.84
CASC3-204ENST00000474190 TM4SF18Q96CE8 201 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 KCNC2Q96PR1 638 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 OR52B2Q96RD2 323 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 EBF4Q9BQW3 602 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 ACTL8Q9H568 366 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 WDR55Q9H6Y2 383 aaPredicted RBP9.79□□□□□ -0.84
CASC3-204ENST00000474190 AKTIPQ9H8T0 292 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 HCN3Q9P1Z3 774 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 IL17BQ9UHF5 180 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 USH1CQ9Y6N9 552 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 ACACAQ13085 2346 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 PCSK5Q92824 1860 aa9.79□□□□□ -0.84
CASC3-204ENST00000474190 A0A1W2PR48 441 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 A0A1W2PS29 197 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 STMND1H3BQB6 276 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 ANKRD28O15084 1053 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 PRKRAO75569 313 aaKnown RBP9.78□□□□□ -0.84
CASC3-204ENST00000474190 BMP10O95393 424 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 KLK1P06870 262 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 ALDOCP09972 364 aaKnown RBP9.78□□□□□ -0.84
CASC3-204ENST00000474190 KITP10721 976 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 EPHA3P29320 983 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 TSFMP43897 325 aaKnown RBP9.78□□□□□ -0.84
CASC3-204ENST00000474190 IDH3AP50213 366 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 SEC24CP53992 1094 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 MTTPP55157 894 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 DCDP81605 110 aaKnown RBP9.78□□□□□ -0.84
CASC3-204ENST00000474190 ABHD18Q0P651 414 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 ERV3-1Q14264 604 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 NKG7Q16617 165 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 VWA2Q5GFL6 755 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 ABHD13Q7L211 337 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 NLGN4XQ8N0W4 816 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 NLGN4YQ8NFZ3 816 aaPredicted RBP9.78□□□□□ -0.84
CASC3-204ENST00000474190 SREK1Q8WXA9 508 aaKnown RBP9.78□□□□□ -0.84
CASC3-204ENST00000474190 RGMAQ96B86 450 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 CLIP3Q96DZ5 547 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 MMABQ96EY8 250 aaPredicted RBP9.78□□□□□ -0.84
CASC3-204ENST00000474190 EGLN2Q96KS0 407 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 PPP1R36Q96LQ0 422 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 SERINC2Q96SA4 455 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 TGIF2Q9GZN2 237 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 LRTM1Q9HBL6 345 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 ZNF304Q9HCX3 659 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 THSD1Q9NS62 852 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 FGFR1OP2Q9NVK5 253 aa9.78□□□□□ -0.84
CASC3-204ENST00000474190 TEX10Q9NXF1 929 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms