RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 DUSP8Q13202 625 aa9.41□□□□□ -0.9
CDHR3-209ENST00000472116 MSLNQ13421 630 aaPredicted RBP9.41□□□□□ -0.9
CDHR3-209ENST00000472116 POU6F1Q14863 301 aa9.41□□□□□ -0.9
CDHR3-209ENST00000472116 FASTKD1Q53R41 847 aaKnown RBP9.41□□□□□ -0.9
CDHR3-209ENST00000472116 EEF1A1P5Q5VTE0 462 aa9.41□□□□□ -0.9
CDHR3-209ENST00000472116 AFTPHQ6ULP2 937 aa9.41□□□□□ -0.9
CDHR3-209ENST00000472116 SYDE1Q6ZW31 735 aaPredicted RBP9.41□□□□□ -0.9
CDHR3-209ENST00000472116 VN1R4Q7Z5H5 301 aa9.41□□□□□ -0.9
CDHR3-209ENST00000472116 MEX3DQ86XN8 651 aaKnown RBP9.41□□□□□ -0.9
CDHR3-209ENST00000472116 KCT2Q8NC54 265 aa9.41□□□□□ -0.9
CDHR3-209ENST00000472116 SLC13A3Q8WWT9 602 aa9.41□□□□□ -0.9
CDHR3-209ENST00000472116 GTPBP3Q969Y2 492 aaKnown RBP9.41□□□□□ -0.9
CDHR3-209ENST00000472116 JSRP1Q96MG2 331 aaPredicted RBP9.41□□□□□ -0.9
CDHR3-209ENST00000472116 WFIKKN1Q96NZ8 548 aa9.41□□□□□ -0.9
CDHR3-209ENST00000472116 QRFPRQ96P65 431 aa9.41□□□□□ -0.9
CDHR3-209ENST00000472116 QKIQ96PU8 341 aaKnown RBP eCLIP9.41□□□□□ -0.9
CDHR3-209ENST00000472116 FAM111AQ96PZ2 611 aa9.41□□□□□ -0.9
CDHR3-209ENST00000472116 LIN28AQ9H9Z2 209 aaKnown RBP9.41□□□□□ -0.9
CDHR3-209ENST00000472116 CALHM2Q9HA72 323 aa9.41□□□□□ -0.9
CDHR3-209ENST00000472116 PNO1Q9NRX1 252 aaKnown RBP9.41□□□□□ -0.9
CDHR3-209ENST00000472116 TMEM184CQ9NVA4 438 aa9.41□□□□□ -0.9
CDHR3-209ENST00000472116 DDX56Q9NY93 547 aaKnown RBP9.41□□□□□ -0.9
CDHR3-209ENST00000472116 LIMA1Q9UHB6 759 aaKnown RBP9.41□□□□□ -0.9
CDHR3-209ENST00000472116 TSR3Q9UJK0 312 aaKnown RBP9.41□□□□□ -0.9
CDHR3-209ENST00000472116 ZNF281Q9Y2X9 895 aa9.41□□□□□ -0.9
CDHR3-209ENST00000472116 PCDHA13Q9Y5I0 950 aa9.41□□□□□ -0.9
CDHR3-209ENST00000472116 CCDC162PA2VCL2 907 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 H7C0C1 242 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 CATP04040 527 aaKnown RBP9.4□□□□□ -0.9
CDHR3-209ENST00000472116 CCL3P10147 92 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 ERGP11308 486 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 HNF1AP20823 631 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 ATP5OP48047 213 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 CASP9P55211 416 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 CRYZQ08257 329 aaKnown RBP9.4□□□□□ -0.9
CDHR3-209ENST00000472116 BMPR2Q13873 1038 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 SPARCL1Q14515 664 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 P3H1Q32P28 736 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 XKR6Q5GH73 641 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 AARS2Q5JTZ9 985 aaKnown RBP9.4□□□□□ -0.9
CDHR3-209ENST00000472116 SCIMPQ6UWF3 145 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 HSDL2Q6YN16 418 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 PDLIM2Q96JY6 352 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 TIMP4Q99727 224 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 TM9SF2Q99805 663 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 ANGPTL4Q9BY76 406 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 PRDM14Q9GZV8 571 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 C12orf65Q9H3J6 166 aaKnown RBP9.4□□□□□ -0.9
CDHR3-209ENST00000472116 ARNT2Q9HBZ2 717 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 ZFP64Q9NPA5 681 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 SEMA4BQ9NPR2 832 aaPredicted RBP9.4□□□□□ -0.9
CDHR3-209ENST00000472116 PACSIN3Q9UKS6 424 aa9.4□□□□□ -0.9
CDHR3-209ENST00000472116 BZW2Q9Y6E2 419 aaKnown RBP9.4□□□□□ -0.9
CDHR3-209ENST00000472116 SERINC4A6NH21 518 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 PRMT5O14744 637 aaPredicted RBP9.39□□□□□ -0.91
CDHR3-209ENST00000472116 GALR3O60755 368 aaPredicted RBP9.39□□□□□ -0.91
CDHR3-209ENST00000472116 TRAPPC6AO75865 159 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 GAS8O95995 478 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 RNH1P13489 461 aaKnown RBP9.39□□□□□ -0.91
CDHR3-209ENST00000472116 CYP4B1P13584 511 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 TNNT1P13805 278 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 CREB1P16220 341 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 GCKP35557 465 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 PIGAP37287 484 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 RPL21P46778 160 aaKnown RBP9.39□□□□□ -0.91
CDHR3-209ENST00000472116 GPR143P51810 404 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 GAB1Q13480 694 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 SQLEQ14534 574 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 DEFB134Q4QY38 66 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 SLC22A10Q63ZE4 541 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 DENND5AQ6IQ26 1287 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 CAPN13Q6MZZ7 669 aaPredicted RBP9.39□□□□□ -0.91
CDHR3-209ENST00000472116 CCDC50Q8IVM0 306 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 LRRC25Q8N386 305 aaPredicted RBP9.39□□□□□ -0.91
CDHR3-209ENST00000472116 ZNF611Q8N823 705 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 PPFIBP2Q8ND30 876 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 GABPB2Q8TAK5 448 aaPredicted RBP9.39□□□□□ -0.91
CDHR3-209ENST00000472116 SLC22A8Q8TCC7 542 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 CTNNBL1Q8WYA6 563 aaPredicted RBP9.39□□□□□ -0.91
CDHR3-209ENST00000472116 HAUS1Q96CS2 278 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 ZC3HAV1LQ96H79 300 aaKnown RBP9.39□□□□□ -0.91
CDHR3-209ENST00000472116 GORASP1Q9BQQ3 440 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 RHBGQ9H310 441 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 SH2D2AQ9NP31 389 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 ZNF223Q9UK11 482 aaPredicted RBP9.39□□□□□ -0.91
CDHR3-209ENST00000472116 LAMP3Q9UQV4 416 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 MMACHCQ9Y4U1 282 aa9.39□□□□□ -0.91
CDHR3-209ENST00000472116 IGKV3D-11A0A0A0MRZ8 115 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 A8MXE2 369 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 MYO1CO00159 1063 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 PRKNO60260 465 aaPredicted RBP9.38□□□□□ -0.91
CDHR3-209ENST00000472116 SMNDC1O75940 238 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDHR3-209ENST00000472116 SYF2O95926 243 aaKnown RBP9.38□□□□□ -0.91
CDHR3-209ENST00000472116 GOT2P00505 430 aaKnown RBP9.38□□□□□ -0.91
CDHR3-209ENST00000472116 H2AFZP0C0S5 128 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 RFPL3SP0C7P2 107 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 ALOX12P18054 663 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 RBL1P28749 1068 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 ACVR1BP36896 505 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 HK2P52789 917 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms