RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 Q6ZS92 163 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 RPS27LQ71UM5 84 aaKnown RBP8.6□□□□□ -1.03
SYN3-211ENST00000472027 LCA5Q86VQ0 697 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 CYP4X1Q8N118 509 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 SIRT6Q8N6T7 355 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 CATSPER1Q8NEC5 780 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 OR52B6Q8NGF0 335 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 DNAJB14Q8TBM8 379 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 M1APQ8TC57 530 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 NSUN5Q96P11 429 aaKnown RBP8.6□□□□□ -1.03
SYN3-211ENST00000472027 KCNC2Q96PR1 638 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 MTERF1Q99551 399 aaKnown RBP8.6□□□□□ -1.03
SYN3-211ENST00000472027 LPAR4Q99677 370 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 TBCDQ9BTW9 1192 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 NTMT1Q9BV86 223 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 ROGDIQ9GZN7 287 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 OR51B5Q9H339 312 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 COPS7BQ9H9Q2 264 aaPredicted RBP8.6□□□□□ -1.03
SYN3-211ENST00000472027 ZBTB26Q9HCK0 441 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 PRDM9Q9NQV7 894 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 DCDC2Q9UHG0 476 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 PCTPQ9UKL6 214 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 DAPP1Q9UN19 280 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 TSC22D4Q9Y3Q8 395 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 CSAG2Q9Y5P2 127 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 MED13Q9UHV7 2174 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 IGKV3D-11A0A0A0MRZ8 115 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 TCRBV16S1A1N1A0A5B0 115 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 SMIM23A6NLE4 172 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 A8MT66 165 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 A8MUA0 341 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 A8MUI8 341 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 FOXO6A8MYZ6 492 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 CYR61O00622 381 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 CLDN4O14493 209 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 DLX3O60479 287 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 GSTA1P08263 222 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 RPS17P08708 135 aaKnown RBP8.59□□□□□ -1.03
SYN3-211ENST00000472027 HIST1H1TP22492 207 aaPredicted RBP8.59□□□□□ -1.03
SYN3-211ENST00000472027 ATP5A1P25705 553 aaKnown RBP8.59□□□□□ -1.03
SYN3-211ENST00000472027 PTX3P26022 381 aaPredicted RBP8.59□□□□□ -1.03
SYN3-211ENST00000472027 CERS1P27544 350 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 SOX11P35716 441 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 HSD17B3P37058 310 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 ARL1P40616 181 aaPredicted RBP8.59□□□□□ -1.03
SYN3-211ENST00000472027 NEK2P51955 445 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 CCNG1P51959 295 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 HNRNPFP52597 415 aaKnown RBP8.59□□□□□ -1.03
SYN3-211ENST00000472027 CDH13P55290 713 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 RPS13P62277 151 aaKnown RBP8.59□□□□□ -1.03
SYN3-211ENST00000472027 PHEXP78562 749 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 ZRSR2Q15696 482 aaKnown RBP8.59□□□□□ -1.03
SYN3-211ENST00000472027 INPP5JQ15735 1006 aaPredicted RBP8.59□□□□□ -1.03
SYN3-211ENST00000472027 EXT1Q16394 746 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 AP5B1Q2VPB7 878 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 OR4C11Q6IEV9 310 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 H3F3CQ6NXT2 135 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 ZNF793Q6ZN11 406 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 SH2D5Q6ZV89 423 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 MILR1Q7Z6M3 343 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 TDRPQ86YL5 185 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 ACOT4Q8N9L9 421 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 FAM47BQ8NA70 645 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 TMEM52Q8NDY8 209 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 ARMC2Q8NEN0 867 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 OR4F6Q8NGB9 312 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 WDR20Q8TBZ3 569 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 CPT1CQ8TCG5 803 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 ADAMTS18Q8TE60 1221 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 PPP4R1Q8TF05 950 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 HAS2Q92819 552 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 MIB2Q96AX9 1013 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 RGMAQ96B86 450 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 REPS1Q96D71 796 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 MTFMTQ96DP5 389 aaKnown RBP8.59□□□□□ -1.03
SYN3-211ENST00000472027 MAGEB10Q96LZ2 347 aaPredicted RBP8.59□□□□□ -1.03
SYN3-211ENST00000472027 MAPKAP1Q9BPZ7 522 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 C1QTNF3Q9BXJ4 246 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 ILKAPQ9H0C8 392 aaPredicted RBP8.59□□□□□ -1.03
SYN3-211ENST00000472027 PPCSQ9HAB8 311 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 KCNK13Q9HB14 408 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 MMP25Q9NPA2 562 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 SEMA4BQ9NPR2 832 aaPredicted RBP8.59□□□□□ -1.03
SYN3-211ENST00000472027 DMRT3Q9NQL9 472 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 PRTFDC1Q9NRG1 225 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 PSD3Q9NYI0 1048 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 PLA2G3Q9NZ20 509 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 STMN3Q9NZ72 180 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 KCMF1Q9P0J7 381 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 PLAAQ9Y263 795 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 MMACHCQ9Y4U1 282 aa8.59□□□□□ -1.03
SYN3-211ENST00000472027 A0A1B0GTL3 188 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 DYTNA2CJ06 578 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 FOXE1O00358 373 aaPredicted RBP8.58□□□□□ -1.04
SYN3-211ENST00000472027 PPP6CO00743 305 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 PLPP1O14494 284 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 CTNSO60931 367 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 SUPT7LO94864 414 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 SCELO95171 688 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 UQCRHP07919 91 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms