RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ZNF227Q86WZ6 799 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 SIAH3Q8IW03 269 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 SCUBE1Q8IWY4 988 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 ZNF808Q8N4W9 903 aaPredicted RBP21.06■□□□□ 0.96
C9orf3-213ENST00000471978 APCDD1LQ8NCL9 501 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 OR2L5Q8NG80 312 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 TMEM125Q96AQ2 219 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 QRFPRQ96P65 431 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 REXO4Q9GZR2 422 aaKnown RBP21.06■□□□□ 0.96
C9orf3-213ENST00000471978 PRTFDC1Q9NRG1 225 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 GRHL1Q9NZI5 618 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 TINAGQ9UJW2 476 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 ZNF835Q9Y2P0 537 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 KLF2Q9Y5W3 355 aaPredicted RBP21.06■□□□□ 0.96
C9orf3-213ENST00000471978 CLDN4O14493 209 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 ASNA1O43681 348 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 PRAMEF4O60810 478 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 TBX6O95947 436 aaPredicted RBP21.05■□□□□ 0.96
C9orf3-213ENST00000471978 ESRRAP11474 423 aaPredicted RBP21.05■□□□□ 0.96
C9orf3-213ENST00000471978 CLCN2P51788 898 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 HSD17B7P56937 341 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 RAB38P57729 211 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 RAB10P61026 200 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 C2orf54Q08AI8 447 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 SLC13A2Q13183 592 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 TERF2Q15554 542 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 ADPRMQ3LIE5 342 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 PRAMEF9Q5VWM5 478 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 TRIM40Q6P9F5 258 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 VN1R5Q7Z5H4 357 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 SPPL2CQ8IUH8 684 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 CTAGE3PQ8IX95 158 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 ARMC10Q8N2F6 343 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 FAM47BQ8NA70 645 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 TMEM52Q8NDY8 209 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 PTCD3Q96EY7 689 aaKnown RBP21.05■□□□□ 0.96
C9orf3-213ENST00000471978 ZNF490Q9ULM2 529 aaPredicted RBP21.05■□□□□ 0.96
C9orf3-213ENST00000471978 RNF112Q9ULX5 631 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 MRPS33Q9Y291 106 aaKnown RBP21.05■□□□□ 0.96
C9orf3-213ENST00000471978 CSMD1Q96PZ7 3565 aa21.05■□□□□ 0.96
C9orf3-213ENST00000471978 S100BP04271 92 aaPredicted RBP21.04■□□□□ 0.96
C9orf3-213ENST00000471978 GSTA2P09210 222 aa21.04■□□□□ 0.96
C9orf3-213ENST00000471978 GRNP28799 593 aaKnown RBP21.04■□□□□ 0.96
C9orf3-213ENST00000471978 HNRNPFP52597 415 aaKnown RBP21.04■□□□□ 0.96
C9orf3-213ENST00000471978 GPX6P59796 221 aa21.04■□□□□ 0.96
C9orf3-213ENST00000471978 DOC2AQ14183 400 aa21.04■□□□□ 0.96
C9orf3-213ENST00000471978 ZKSCAN8Q15776 578 aaPredicted RBP21.04■□□□□ 0.96
C9orf3-213ENST00000471978 PDK4Q16654 411 aa21.04■□□□□ 0.96
C9orf3-213ENST00000471978 ADNP2Q6IQ32 1131 aa21.04■□□□□ 0.96
C9orf3-213ENST00000471978 Q6ZPB1 254 aaPredicted RBP21.04■□□□□ 0.96
C9orf3-213ENST00000471978 CPSF7Q8N684 471 aaKnown RBP21.04■□□□□ 0.96
C9orf3-213ENST00000471978 PDPRQ8NCN5 879 aa21.04■□□□□ 0.96
C9orf3-213ENST00000471978 ADAMTS18Q8TE60 1221 aa21.04■□□□□ 0.96
C9orf3-213ENST00000471978 KIAA1191Q96A73 305 aa21.04■□□□□ 0.96
C9orf3-213ENST00000471978 WDR34Q96EX3 536 aa21.04■□□□□ 0.96
C9orf3-213ENST00000471978 UBXN10Q96LJ8 280 aa21.04■□□□□ 0.96
C9orf3-213ENST00000471978 SERINC2Q96SA4 455 aa21.04■□□□□ 0.96
C9orf3-213ENST00000471978 EFCAB11Q9BUY7 163 aa21.04■□□□□ 0.96
C9orf3-213ENST00000471978 PTBP2Q9UKA9 531 aaKnown RBP21.04■□□□□ 0.96
C9orf3-213ENST00000471978 FBXW2Q9UKT8 454 aa21.04■□□□□ 0.96
C9orf3-213ENST00000471978 TGFBR3LH3BV60 316 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 CCNT2O60583 730 aaKnown RBP21.03■□□□□ 0.96
C9orf3-213ENST00000471978 C1QAP02745 245 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 PRF1P14222 555 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 ZNF24P17028 368 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 CERS1P27544 350 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 PPP2R1BP30154 601 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 SPRP35270 261 aaPredicted RBP21.03■□□□□ 0.96
C9orf3-213ENST00000471978 PLTPP55058 493 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 MTTPP55157 894 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 RNFT1Q5M7Z0 435 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 GRTP1Q5TC63 336 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 ABHD17CQ6PCB6 329 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 BNC2Q6ZN30 1099 aaPredicted RBP21.03■□□□□ 0.96
C9orf3-213ENST00000471978 ZNF595Q8IYB9 648 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 GHDCQ8N2G8 530 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 EXT2Q93063 718 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 NCLNQ969V3 563 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 VMP1Q96GC9 406 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 COPS7BQ9H9Q2 264 aaPredicted RBP21.03■□□□□ 0.96
C9orf3-213ENST00000471978 PPIEQ9UNP9 301 aaKnown RBP21.03■□□□□ 0.96
C9orf3-213ENST00000471978 UTP11Q9Y3A2 253 aaKnown RBP21.03■□□□□ 0.96
C9orf3-213ENST00000471978 CLDN16Q9Y5I7 305 aa21.03■□□□□ 0.96
C9orf3-213ENST00000471978 CD22P20273 847 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 HTR1EP28566 365 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 GMPRP36959 345 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 LIM2P55344 173 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 ADORA2A-AS1P86434 159 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 TGM3Q08188 693 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 LAPTM5Q13571 262 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 HIST2H2ACQ16777 129 aaPredicted RBP21.02■□□□□ 0.96
C9orf3-213ENST00000471978 KBTBD12Q3ZCT8 623 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 PAGE2BQ5JRK9 111 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 HIST2H2AA3Q6FI13 130 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 XKRXQ6PP77 449 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 RAPH1Q70E73 1250 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 CLNKQ7Z7G1 428 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 CCDC25Q86WR0 208 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 SRRM1Q8IYB3 904 aaKnown RBP21.02■□□□□ 0.96
C9orf3-213ENST00000471978 TMEM156Q8N614 296 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms