RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 A8MXE2 369 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 FAM220BPB1ANY3 271 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 ZNF732B4DXR9 585 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 FBP2O00757 339 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 P4HA2O15460 535 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 FLRT2O43155 660 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 B4GAT1O43505 415 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 FCGR3BO75015 233 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 KRT6AP02538 564 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 KRT6BP04259 564 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 SUPT20HL2P0C7V6 817 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 SP9P0CG40 484 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 DLATP10515 647 aaKnown RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 UMPSP11172 480 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 PSMA3P25788 255 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 RPL9P32969 192 aaKnown RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 SPRP35270 261 aaPredicted RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 SLC1A3P43003 542 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 RAD52P43351 418 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 CDX1P47902 265 aaPredicted RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 KRT6CP48668 564 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 RPL34P49207 117 aaKnown RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 GMPSP49915 693 aaPredicted RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 IST1P53990 364 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 ADARP55265 1226 aaKnown RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 BACE1P56817 501 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 RPP38P78345 283 aaKnown RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 IGLV3-21P80748 117 aaPredicted RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 NAAAQ02083 359 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 TNK1Q13470 666 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 FASTKQ14296 549 aaKnown RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 ZNF273Q14593 569 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 RASA2Q15283 850 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 PCK2Q16822 640 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 SLC22A6Q4U2R8 563 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 RFTN2Q52LD8 501 aaPredicted RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 VWA2Q5GFL6 755 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 MFSD4BQ5TF39 518 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 MARC1Q5VT66 337 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 OLFML2AQ68BL7 652 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 TXNRD3NBQ6F5E7 133 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 NEPROQ6NW34 567 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 TMEM64Q6YI46 380 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 C17orf107Q6ZR85 190 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 C11orf57Q6ZUT1 292 aaPredicted RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 CHST3Q7LGC8 479 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 DNAJB7Q7Z6W7 309 aaPredicted RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 NAXDQ8IW45 347 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 CCAR2Q8N163 923 aaKnown RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 SLC43A2Q8N370 569 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 PARP8Q8N3A8 854 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 IQUBQ8NA54 791 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 OR6F1Q8NGZ6 308 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 NCOA7Q8NI08 942 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 FLVCR1-AS1Q8TAF5 88 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 CD99L2Q8TCZ2 262 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 GTSF1Q8WW33 167 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 SMPDL3AQ92484 453 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 RAD54LQ92698 747 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 VPS33AQ96AX1 596 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 TSSK2Q96PF2 358 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 RCHY1Q96PM5 261 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 ALKBH3Q96Q83 286 aaPredicted RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 MGME1Q9BQP7 344 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 CENPOQ9BU64 300 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 TEX13BQ9BXU2 312 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 TXLNGYQ9BZA5 131 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 NACAP1Q9BZK3 213 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 UBA5Q9GZZ9 404 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 UBQLN3Q9H347 655 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 RABEP2Q9H5N1 569 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 C10orf88Q9H8K7 445 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 LMAN1LQ9HAT1 526 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 PLEKHA3Q9HB20 300 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 NMUR1Q9HB89 426 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 ANKEF1Q9NU02 776 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 DHRS4-AS1Q9P1J3 65 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 ARMCX1Q9P291 453 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 RSPH14Q9UHP6 348 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 IKZF3Q9UKT9 509 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 SNX7Q9UNH6 387 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 SH3GLB1Q9Y371 365 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 MRPL11Q9Y3B7 192 aaKnown RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 CPQQ9Y646 472 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 POGZQ7Z3K3 1410 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 SPATA31D1Q6ZQQ2 1576 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 COL16A1Q07092 1604 aaPredicted RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 A0A087WV48 116 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 KLF18A0A0U1RQI7 1052 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 C2orf92A0A1B0GVN3 265 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 ANXA2P2A6NMY6 339 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF724A8MTY0 619 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 TMCO5BA8MYB1 307 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF487B1APH4 448 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 FAM86B1E9PN63 330 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 H0Y9J4 135 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 LRRTM2O43300 516 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 TBX10O75333 385 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 FRAT2O75474 233 aaPredicted RBP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 FGF19O95750 216 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms