RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 RSPRY1Q96DX4 576 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 GJD4Q96KN9 370 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-210ENST00000471181 RPL10LQ96L21 214 aaKnown RBP6.67□□□□□ -1.34
BRCA1-210ENST00000471181 TMEM209Q96SK2 561 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 TSSK6Q9BXA6 273 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 TLR10Q9BXR5 811 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 C12orf65Q9H3J6 166 aaKnown RBP6.67□□□□□ -1.34
BRCA1-210ENST00000471181 SMCO4Q9NRQ5 59 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 PLCXD1Q9NUJ7 323 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 ACSL5Q9ULC5 683 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 CNTNAP1P78357 1384 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 PTPRMP28827 1452 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 ERVK-7P63135 1459 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 C17orf113A0A1B0GUU1 675 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 C5orf60A6NFR6 353 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 EI24O14681 340 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 AGPAT2O15120 278 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 RBBP9O75884 186 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 IL3P08700 152 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 H2AFB2P0C5Z0 115 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 KLRK1P26718 216 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 FRKP42685 505 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-210ENST00000471181 BDKRB1P46663 353 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 TAS2R43P59537 309 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 FGL2Q14314 439 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 TSGA10IPQ3SY00 556 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 GPR155Q7Z3F1 870 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 TRAM1L1Q8N609 369 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 GTF2H4Q92759 462 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 HOXB13Q92826 284 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-210ENST00000471181 SLAMF9Q96A28 289 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 MRPL38Q96DV4 380 aaKnown RBP6.67□□□□□ -1.34
BRCA1-210ENST00000471181 SCRN2Q96FV2 425 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 HMCESQ96FZ2 354 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 UNKLQ9H9P5 680 aaKnown RBP6.67□□□□□ -1.34
BRCA1-210ENST00000471181 PLAGL1Q9UM63 463 aa6.67□□□□□ -1.34
BRCA1-210ENST00000471181 MAFBQ9Y5Q3 323 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-210ENST00000471181 OR6C75A6NL08 312 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 INMT-MINDY4F8WBC2 141 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 SLC1A7O00341 560 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 SCO2O43819 266 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 POP4O95707 220 aaKnown RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 NDST3O95803 873 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 RHCEP18577 417 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 BMP6P22004 513 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 AQP2P41181 271 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 UBE2NP61088 152 aaKnown RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ERVK-25P63136 954 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ITPRIPL2Q3MIP1 535 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 EEF1DP3Q658K8 133 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 HGSNATQ68CP4 663 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 KLHDC10Q6PID8 442 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 PDSS2Q86YH6 399 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ZNF781Q8N8C0 355 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 LINC00116Q8NCU8 138 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 OR2A12Q8NGT7 310 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 OR8K5Q8NH50 307 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 CYP2W1Q8TAV3 490 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 C16orf78Q8WTQ4 265 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 THAP3Q8WTV1 239 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 FBXL8Q96CD0 374 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 MAELQ96JY0 434 aaKnown RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 URM1Q9BTM9 101 aaKnown RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 RBCK1Q9BYM8 510 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 GLIS2Q9BZE0 524 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 TP63Q9H3D4 680 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 SEMA6CQ9H3T2 930 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 TEX10Q9NXF1 929 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 PCDHGA11Q9Y5H2 935 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 RIC1Q4ADV7 1423 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 CDK12Q9NYV4 1490 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 DLGAP1O14490 977 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 CDH1P12830 882 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 LAG3P18627 525 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 DPP6P42658 865 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 IDH3AP50213 366 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 AIF1P55008 147 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 NOMO3P69849 1222 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 FGL1Q08830 312 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 NOMO1Q15155 1222 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 DHCR24Q15392 516 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 QPCTQ16769 361 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ELP2Q6IA86 826 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 TMCO2Q7Z6W1 182 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 IFNL1Q8IU54 200 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 MAP4K3Q8IVH8 894 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 TTLQ8NG68 377 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 MOAP1Q96BY2 351 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ZNF559Q9BR84 538 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 WDR26Q9H7D7 661 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ZNF286AQ9HBT8 521 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ZBTB26Q9HCK0 441 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ITM2CQ9NQX7 267 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ZNF358Q9NW07 568 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 THUMPD1Q9NXG2 353 aaKnown RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 EIF4EP06730 217 aaKnown RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ADRB2P07550 413 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 RPL10P27635 214 aaKnown RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 MARCKSL1P49006 195 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 MC2RQ01718 297 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms