RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CRYABP02511 175 aaKnown RBP8.57□□□□□ -1.04
SF3A1-206ENST00000471037 SERPINE1P05121 402 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 ERGP11308 486 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 NCF1P14598 390 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-206ENST00000471037 IMPDH1P20839 514 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 BGNP21810 368 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 GGT5P36269 586 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 SERPINB5P36952 375 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 PIK3CGP48736 1102 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 GYS2P54840 703 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 EMP2P54851 167 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 AP2B1P63010 937 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 PCBP2Q15366 365 aaKnown RBP eCLIP8.57□□□□□ -1.04
SF3A1-206ENST00000471037 CCSMST1Q4G0I0 132 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 CFAP157Q5JU67 520 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF678Q5SXM1 525 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 LRRC70Q7Z2Q7 622 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 MRGPRGQ86SM5 289 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 LAPTM4BQ86VI4 370 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 KLHDC8AQ8IYD2 350 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 PRSS58Q8IYP2 241 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 SIRT6Q8N6T7 355 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 AMER3Q8N944 861 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 OR6Y1Q8NGX8 325 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF75CPQ92670 426 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-206ENST00000471037 PHF21BQ96EK2 531 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 LURAP1Q96LR2 239 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 TMEM237Q96Q45 408 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 PKP4Q99569 1192 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 TRMOQ9BU70 441 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 GATA5Q9BWX5 397 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-206ENST00000471037 CAPS2Q9BXY5 557 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 MANSC1Q9H8J5 431 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 MKKSQ9NPJ1 570 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-206ENST00000471037 PLA2G3Q9NZ20 509 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 STOX2Q9P2F5 926 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-206ENST00000471037 CPAMD8Q8IZJ3 1885 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 SVILO95425 2214 aa8.57□□□□□ -1.04
SF3A1-206ENST00000471037 TRGV8A0A0C4DH27 118 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 KRT87PA6NCN2 255 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 OR5H15A6NDH6 313 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 H0YGG7 62 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 CCL21O00585 134 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 TAPBPO15533 448 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 NPHS1O60500 1241 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 STK16O75716 305 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 WFS1O76024 890 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 RASAL1O95294 804 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 WDPCPO95876 746 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 SLC16A8O95907 504 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 EIF2S1P05198 315 aaKnown RBP8.56□□□□□ -1.04
SF3A1-206ENST00000471037 RPS17P08708 135 aaKnown RBP8.56□□□□□ -1.04
SF3A1-206ENST00000471037 ICAM2P13598 275 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 AGAP20933 346 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 CCND1P24385 295 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 MST1P26927 711 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 HTR1EP28566 365 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 IMPA1P29218 277 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 EEF1DP29692 281 aaKnown RBP8.56□□□□□ -1.04
SF3A1-206ENST00000471037 CMPK1P30085 196 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 NAGLUP54802 743 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 ARF3P61204 181 aaPredicted RBP8.56□□□□□ -1.04
SF3A1-206ENST00000471037 GNGT1P63211 74 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 YBX1P67809 324 aaKnown RBP8.56□□□□□ -1.04
SF3A1-206ENST00000471037 EEF1A2Q05639 463 aaKnown RBP8.56□□□□□ -1.04
SF3A1-206ENST00000471037 STX3Q13277 289 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 RCN2Q14257 317 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 PCOLCEQ15113 449 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 GARNL3Q5VVW2 1013 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 FBXO42Q6P3S6 717 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 AGTRAPQ6RW13 159 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 TMEM205Q6UW68 189 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 MBOAT1Q6ZNC8 495 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 FRMD7Q6ZUT3 714 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 ARHGEF39Q8N4T4 335 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 CCNYL1Q8N7R7 359 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 OR56A3Q8NH54 315 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 IMMP1LQ96LU5 166 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 PLCD4Q9BRC7 762 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 TMEM79Q9BSE2 394 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 DPH7Q9BTV6 452 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 TUBB6Q9BUF5 446 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 CD244Q9BZW8 370 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 DRC3Q9H069 523 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.56□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF700Q9H0M5 742 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 TRPC4Q9UBN4 977 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 SEC14L3Q9UDX4 400 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 ADAM21Q9UKJ8 722 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 RUVBL1Q9Y265 456 aaKnown RBP8.56□□□□□ -1.04
SF3A1-206ENST00000471037 STK38LQ9Y2H1 464 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 PCDHGB6Q9Y5F9 930 aa8.56□□□□□ -1.04
SF3A1-206ENST00000471037 HEATR5BQ9P2D3 2071 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 IGKV1-8A0A0C4DH67 115 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 K7EPI3 171 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 FOXS1O43638 330 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 PRAMEF2O60811 474 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 SNNO75324 88 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-206ENST00000471037 SUPT7LO94864 414 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 SIX3O95343 332 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms