RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 FAR2Q96K12 515 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 GPR137Q96N19 417 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 EFCAB11Q9BUY7 163 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 REXO4Q9GZR2 422 aaKnown RBP15.24■□□□□ 0.03
COL9A3-208ENST00000469802 RAB17Q9H0T7 212 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 LRFN1Q9P244 771 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 UTP11Q9Y3A2 253 aaKnown RBP15.24■□□□□ 0.03
COL9A3-208ENST00000469802 LRBAP50851 2863 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 CACNA1CQ13936 2221 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 MYO9AB2RTY4 2548 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 A0A088AWK7 358 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 CLGNO14967 610 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 B3GALT2O43825 422 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 SLC25A12O75746 678 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 FAM155BO75949 473 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 SP1P08047 785 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 ZNF10P21506 573 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-208ENST00000469802 CERS1P27544 350 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 CASQ1P31415 396 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 HPDP32754 393 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-208ENST00000469802 STX2P32856 288 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 CASP2P42575 452 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 MAGEA4P43358 317 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 GPR143P51810 404 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 OC90Q02509 493 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-208ENST00000469802 NAB1Q13506 487 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 TBCCQ15814 346 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 XKR6Q5GH73 641 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 TRIM40Q6P9F5 258 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 LRRC70Q7Z2Q7 622 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 GALNTL5Q7Z4T8 443 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 CMC1Q7Z7K0 106 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 ISCA2Q86U28 154 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 TICAM1Q8IUC6 712 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 CTAGE3PQ8IX95 158 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 SNX31Q8N9S9 440 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 ITLN2Q8WWU7 325 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-208ENST00000469802 CCT6BQ92526 530 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 CCDC120Q96HB5 630 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 SERINC2Q96SA4 455 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 ATOH8Q96SQ7 321 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 NUDT4Q9NZJ9 180 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 CD274Q9NZQ7 290 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 ZNF223Q9UK11 482 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-208ENST00000469802 ENTPD4Q9Y227 616 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 ZNF835Q9Y2P0 537 aa15.23■□□□□ 0.03
COL9A3-208ENST00000469802 EML6Q6ZMW3 1958 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 TRGV8A0A0C4DH27 118 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 ANKDD1BA6NHY2 528 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 CYR61O00622 381 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 SLC19A2O60779 497 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 MYO1DO94832 1006 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 TFEBP19484 476 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 PPP2R1BP30154 601 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 CYB561P49447 251 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 HLCSP50747 726 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 PLA2G16P53816 162 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 MTTPP55157 894 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 LIM2P55344 173 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 RBPJQ06330 500 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 PCDH1Q08174 1060 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 SLMAPQ14BN4 828 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 EFTUD2Q15029 972 aaKnown RBP eCLIP15.22■□□□□ 0.03
COL9A3-208ENST00000469802 SLC25A25Q6KCM7 469 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 SYT10Q6XYQ8 523 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 Q6ZPB1 254 aaPredicted RBP15.22■□□□□ 0.03
COL9A3-208ENST00000469802 CCDC25Q86WR0 208 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 ZNF595Q8IYB9 648 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 SLC34A3Q8N130 599 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 PPM1NQ8N819 430 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 FAM47BQ8NA70 645 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 FBF1Q8TES7 1133 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 CSF3RQ99062 836 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 MS4A8Q9BY19 250 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 CD244Q9BZW8 370 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 ALG9Q9H6U8 611 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 PRDM7Q9NQW5 492 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 PRTFDC1Q9NRG1 225 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 IGSF5Q9NSI5 407 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 RNF112Q9ULX5 631 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 DAPP1Q9UN19 280 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 ABCA12Q86UK0 2595 aa15.22■□□□□ 0.03
COL9A3-208ENST00000469802 TRBV11-1A0A0K0K1C0 115 aa15.21■□□□□ 0.03
COL9A3-208ENST00000469802 SYNDIG1LA6NDD5 238 aa15.21■□□□□ 0.03
COL9A3-208ENST00000469802 A8MUA0 341 aa15.21■□□□□ 0.03
COL9A3-208ENST00000469802 KERAO60938 352 aa15.21■□□□□ 0.03
COL9A3-208ENST00000469802 MLYCDO95822 493 aa15.21■□□□□ 0.03
COL9A3-208ENST00000469802 CLCN2P51788 898 aa15.21■□□□□ 0.03
COL9A3-208ENST00000469802 ALDH6A1Q02252 535 aaKnown RBP15.21■□□□□ 0.03
COL9A3-208ENST00000469802 CHIT1Q13231 466 aa15.21■□□□□ 0.03
COL9A3-208ENST00000469802 LAPTM5Q13571 262 aa15.21■□□□□ 0.03
COL9A3-208ENST00000469802 KRTCAP3Q53RY4 240 aa15.21■□□□□ 0.03
COL9A3-208ENST00000469802 PAGE2BQ5JRK9 111 aa15.21■□□□□ 0.03
COL9A3-208ENST00000469802 RNFT1Q5M7Z0 435 aa15.21■□□□□ 0.03
COL9A3-208ENST00000469802 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.21■□□□□ 0.03
COL9A3-208ENST00000469802 LURAP1LQ8IV03 231 aa15.21■□□□□ 0.03
COL9A3-208ENST00000469802 CHERPQ8IWX8 916 aaKnown RBP15.21■□□□□ 0.03
COL9A3-208ENST00000469802 LAS2Q8IYD9 372 aa15.21■□□□□ 0.03
COL9A3-208ENST00000469802 CENPLQ8N0S6 344 aaPredicted RBP15.21■□□□□ 0.03
COL9A3-208ENST00000469802 FAM98AQ8NCA5 519 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms