RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 PLD3Q8IV08 490 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 ZZZ3Q8IYH5 903 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 C11orf65Q8NCR3 313 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 OR10G6Q8NH81 332 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 SLC37A2Q8TED4 501 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 ZDHHC1Q8WTX9 485 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 RLN3Q8WXF3 142 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 OR5P2Q8WZ92 322 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 RSC1A1Q92681 617 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 SDCCAG3Q96C92 435 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 MS4A6EQ96DS6 147 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 ZBED6CLQ96FA7 236 aaPredicted RBP8.9□□□□□ -0.98
SMC1A-205ENST00000469129 SEPHS2Q99611 448 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 NRTNQ99748 197 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 C17orf62Q9BQA9 187 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 ORAI3Q9BRQ5 295 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 SLC35A5Q9BS91 424 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 LRRC61Q9BV99 259 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 NLNQ9BYT8 704 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 SLC6A16Q9GZN6 736 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 SEMA6AQ9H2E6 1030 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 BATF3Q9NR55 127 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 ACSS1Q9NUB1 689 aaPredicted RBP8.9□□□□□ -0.98
SMC1A-205ENST00000469129 GIMAP4Q9NUV9 329 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 DOLKQ9UPQ8 538 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 USP22Q9UPT9 525 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 EXO1Q9UQ84 846 aaKnown RBP8.9□□□□□ -0.98
SMC1A-205ENST00000469129 BTBD3Q9Y2F9 522 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 KLK4Q9Y5K2 254 aa8.9□□□□□ -0.98
SMC1A-205ENST00000469129 PRAMEF33A0A0G2JMD5 474 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 A0A1W2PR77 199 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 OR6C74A6NCV1 312 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 FAM86C2PA6NEL3 165 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 B4DGG1 531 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 RTCAO00442 366 aaKnown RBP8.89□□□□□ -0.99
SMC1A-205ENST00000469129 STK25O00506 426 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 TXNDC9O14530 226 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 AXIN1O15169 862 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 VILLO15195 856 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 MAP3K13O43283 966 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 LCMT2O60294 686 aaKnown RBP8.89□□□□□ -0.99
SMC1A-205ENST00000469129 TPST1O60507 370 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 B3GALT4O96024 378 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 CSF2P04141 144 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 FAM58BPP0C7Q3 252 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 HIST1H1TP22492 207 aaPredicted RBP8.89□□□□□ -0.99
SMC1A-205ENST00000469129 PCGF2P35227 344 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 SOX11P35716 441 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 MAGEA8P43361 318 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 CXCL12P48061 93 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 ALDH9A1P49189 494 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 CCT8P50990 548 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 CLCN2P51788 898 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 HBA1P69905 142 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 HHEXQ03014 270 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 ELOAQ14241 798 aaKnown RBP8.89□□□□□ -0.99
SMC1A-205ENST00000469129 SUZ12Q15022 739 aaKnown RBP8.89□□□□□ -0.99
SMC1A-205ENST00000469129 MLC1Q15049 377 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 RGNQ15493 299 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 TCEA2Q15560 299 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 WDR45BQ5MNZ6 344 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 GCNT6Q5T4J0 391 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 ABHD17CQ6PCB6 329 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 ZBTB49Q6ZSB9 765 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 TMEM26Q6ZUK4 368 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 NAGSQ8N159 534 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 FAM160A2Q8N612 972 aaPredicted RBP8.89□□□□□ -0.99
SMC1A-205ENST00000469129 CAMKVQ8NCB2 501 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 OR52N2Q8NGI0 321 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 FLVCR1-AS1Q8TAF5 88 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 FBXO30Q8TB52 745 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 JPH3Q8WXH2 748 aaPredicted RBP8.89□□□□□ -0.99
SMC1A-205ENST00000469129 RERGQ96A58 199 aaPredicted RBP8.89□□□□□ -0.99
SMC1A-205ENST00000469129 MOAP1Q96BY2 351 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 TM4SF18Q96CE8 201 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 OR2A14Q96R47 310 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 ZFYVE21Q9BQ24 234 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 SORBS1Q9BX66 1292 aaKnown RBP8.89□□□□□ -0.99
SMC1A-205ENST00000469129 OSBPL11Q9BXB4 747 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.89□□□□□ -0.99
SMC1A-205ENST00000469129 ASPSCR1Q9BZE9 553 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 ABCG4Q9H172 646 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 CHST8Q9H2A9 424 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 TCEAL2Q9H3H9 227 aaPredicted RBP8.89□□□□□ -0.99
SMC1A-205ENST00000469129 UCK1Q9HA47 277 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 LHX9Q9NQ69 397 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 DCAF13Q9NV06 445 aaKnown RBP8.89□□□□□ -0.99
SMC1A-205ENST00000469129 C2orf42Q9NWW7 574 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 TAS2R7Q9NYW3 318 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 PHF11Q9UIL8 331 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 ENTPD4Q9Y227 616 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 ANGPT4Q9Y264 503 aa8.89□□□□□ -0.99
SMC1A-205ENST00000469129 CACNA1IQ9P0X4 2223 aa8.88□□□□□ -0.99
SMC1A-205ENST00000469129 TRBV23OR9-2A0A075B6M9 112 aa8.88□□□□□ -0.99
SMC1A-205ENST00000469129 RNF103-CHMP3A0A140T963 221 aa8.88□□□□□ -0.99
SMC1A-205ENST00000469129 MAGEA13PA6NCF6 341 aa8.88□□□□□ -0.99
SMC1A-205ENST00000469129 OR5K3A6NET4 321 aa8.88□□□□□ -0.99
SMC1A-205ENST00000469129 LILRA5A6NI73 299 aa8.88□□□□□ -0.99
SMC1A-205ENST00000469129 TLR4O00206 839 aa8.88□□□□□ -0.99
SMC1A-205ENST00000469129 CLOCKO15516 846 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms