RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TMEM237Q96Q45 408 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 MNTQ99583 582 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 LRRC61Q9BV99 259 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ACAT2Q9BWD1 397 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 NUSAP1Q9BXS6 441 aaKnown RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 KRTAP4-5Q9BYR2 181 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 GAREM1Q9H706 876 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 IL21RQ9HBE5 538 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 SEMA4BQ9NPR2 832 aaPredicted RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 PNPOQ9NVS9 261 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 TRNAU1APQ9NX07 287 aaKnown RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ZNF624Q9P2J8 865 aaPredicted RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 MARCOQ9UEW3 520 aaPredicted RBP3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 LNPEPQ9UIQ6 1025 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC22A14Q9Y267 594 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 DGKBQ9Y6T7 804 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 COLEC10Q9Y6Z7 277 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 SDK1Q7Z5N4 2213 aa3.93□□□□□ -1.78
TMEM39A-204ENST00000468545 ZNF106Q9H2Y7 1883 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 CPED1A4D0V7 1026 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 GSAPA4D1B5 854 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 OR6C74A6NCV1 312 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 OR5K4A6NMS3 321 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 RHPN2P1A8MT19 583 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ISM1B1AKI9 464 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 EIF3FO00303 357 aaPredicted RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 PPP6CO00743 305 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 STK16O75716 305 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC16A8O95907 504 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 RPN2P04844 631 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 SERPINE1P05121 402 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 CHRNGP07510 517 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 MTHFD1P11586 935 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 F3P13726 295 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC2A4P14672 509 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 AMD1P17707 334 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ENGP17813 658 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 POLR2CP19387 275 aaPredicted RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 SERPINB3P29508 390 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ALDH4A1P30038 563 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 MPLP40238 635 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 PIK3CGP48736 1102 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ARRB1P49407 418 aaPredicted RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 CCNG1P51959 295 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 PNLIPRP1P54315 467 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ALDH18A1P54886 795 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 DNAJB13P59910 316 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 DMPKQ09013 629 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 GRIK2Q13002 908 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 GTF2H2Q13888 395 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 SF3A2Q15428 464 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 SHBQ15464 509 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 CDSNQ15517 529 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 PDK4Q16654 411 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 PPP1R3AQ16821 1122 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 PTCHD3Q3KNS1 767 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 SGO1Q5FBB7 561 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ARL13AQ5H913 290 aaPredicted RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 CES4AQ5XG92 561 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 GTF2H2CQ6P1K8 395 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 IYDQ6PHW0 289 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 SCIMPQ6UWF3 145 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ABRAXAS1Q6UWZ7 409 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 UNC5DQ6UXZ4 953 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 GOLGA7Q7Z5G4 137 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ADCK2Q7Z695 626 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC9B2Q86UD5 537 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 CUZD1Q86UP6 607 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 THOC6Q86W42 341 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 CRLF3Q8IUI8 442 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 DCUN1D3Q8IWE4 304 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 TBC1D21Q8IYX1 336 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 NAGSQ8N159 534 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 TCAIMQ8N3R3 496 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC25A45Q8N413 288 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ARL14Q8N4G2 192 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 EID2Q8N6I1 236 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 Q8N9G6 341 aaPredicted RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ZBTB34Q8NCN2 500 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ZNF548Q8NEK5 533 aaPredicted RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 PRSS33Q8NF86 280 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 NLGN4YQ8NFZ3 816 aaPredicted RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 OR52E1Q8NGJ3 308 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 OR10G6Q8NH81 332 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 OR5K2Q8NHB8 316 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 MAPK15Q8TD08 544 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 SETD7Q8WTS6 366 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 LCN9Q8WX39 176 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ATL1Q8WXF7 558 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 NELL1Q92832 810 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 FBXL8Q96CD0 374 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 CNDP1Q96KN2 507 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 VRK1Q99986 396 aaPredicted RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ELAC2Q9BQ52 826 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 TMEM79Q9BSE2 394 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 NDC1Q9BTX1 674 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 TBC1D10AQ9BXI6 508 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 PITPNM3Q9BZ71 974 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 C20orf27Q9GZN8 174 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ILKAPQ9H0C8 392 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms