RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PAFAH1B1P43034 410 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 HSPA7P48741 367 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 GPR143P51810 404 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 PLA2G16P53816 162 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 SLC12A2P55011 1212 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 ADPRMQ3LIE5 342 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 XKRXQ6PP77 449 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 FAM47BQ8NA70 645 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 PYROXD1Q8WU10 500 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 PHF12Q96QT6 1004 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 NPLQ9BXD5 320 aaPredicted RBP22.84■■□□□ 1.25
PTCH1-210ENST00000468211 DPH5Q9H2P9 285 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 NT5DC2Q9H857 520 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 SAYSD1Q9NPB0 183 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 PRTFDC1Q9NRG1 225 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 WWOXQ9NZC7 414 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 ASB1Q9Y576 335 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 C19orf84I3L1E1 186 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 PRKNO60260 465 aaPredicted RBP22.83■■□□□ 1.25
PTCH1-210ENST00000468211 CLEC3AO75596 197 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 CD1DP15813 335 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 PTGER1P34995 402 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 RFC3P40938 356 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 CLCN2P51788 898 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 RAB38P57729 211 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 C3P1Q6ZMU1 363 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 C16orf47Q6ZP98 133 aaPredicted RBP22.83■■□□□ 1.25
PTCH1-210ENST00000468211 DOLPP1Q86YN1 238 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 GPSM1Q86YR5 675 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 SULF2Q8IWU5 870 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 TTLQ8NG68 377 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 NCLNQ969V3 563 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 CSF3RQ99062 836 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 DNAJC11Q9NVH1 559 aa22.83■■□□□ 1.25
PTCH1-210ENST00000468211 PPIEQ9UNP9 301 aaKnown RBP22.83■■□□□ 1.25
PTCH1-210ENST00000468211 MYOCOSA0A1B0GUC4 107 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 FCHO1O14526 889 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 EPORP19235 508 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 CERS1P27544 350 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 MEOX1P50221 254 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 DOC2AQ14183 400 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 TERF2Q15554 542 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 ABHD17CQ6PCB6 329 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 MDGA2Q7Z553 956 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 CLNKQ7Z7G1 428 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 KRT78Q8N1N4 520 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 GHDCQ8N2G8 530 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 OR2L5Q8NG80 312 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 AGAP11Q8TF27 550 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 TMEM125Q96AQ2 219 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 GPR22Q99680 433 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 RBBP8Q99708 897 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 REXO4Q9GZR2 422 aaKnown RBP22.82■■□□□ 1.24
PTCH1-210ENST00000468211 GPRC5BQ9NZH0 403 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 FBXW2Q9UKT8 454 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 TACC2O95359 2948 aa22.82■■□□□ 1.24
PTCH1-210ENST00000468211 ZNF407Q9C0G0 2248 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 TCRBV9S1A1TA0A576 114 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 ANKDD1BA6NHY2 528 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 CYR61O00622 381 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 ADAM10O14672 748 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 B3GALT2O43825 422 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 ITGA10O75578 1167 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 ABOP16442 354 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 KCNC1P48547 511 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 LIM2P55344 173 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 HSD17B7P56937 341 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 SLC13A2Q13183 592 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 NAA30Q147X3 362 aaPredicted RBP22.81■■□□□ 1.24
PTCH1-210ENST00000468211 SNX31Q8N9S9 440 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 WDR34Q96EX3 536 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 VMP1Q96GC9 406 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 F2RL3Q96RI0 385 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 ERP44Q9BS26 406 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 EHD1Q9H4M9 534 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 LIN28AQ9H9Z2 209 aaKnown RBP22.81■■□□□ 1.24
PTCH1-210ENST00000468211 CHST11Q9NPF2 352 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 GRHL1Q9NZI5 618 aa22.81■■□□□ 1.24
PTCH1-210ENST00000468211 TMEM200CA6NKL6 621 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 FAM159BA6NKW6 160 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 CLGNO14967 610 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 RAD51CO43502 376 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 STK16O75716 305 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 GSTM2P28161 218 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 SMSP52788 366 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 GPX6P59796 221 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 XKR6Q5GH73 641 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 CYP4Z2PQ8N1L4 340 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 TCAIMQ8N3R3 496 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 BBOF1Q8ND07 529 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 SREK1Q8WXA9 508 aaKnown RBP22.8■■□□□ 1.24
PTCH1-210ENST00000468211 TSPAN17Q96FV3 270 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 SEC16BQ96JE7 1060 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 UBXN10Q96LJ8 280 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 SERINC2Q96SA4 455 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 CPNE1Q99829 537 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 CAPS2Q9BXY5 557 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 PITHD1Q9GZP4 211 aaPredicted RBP22.8■■□□□ 1.24
PTCH1-210ENST00000468211 PRDM7Q9NQW5 492 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 WHRNQ9P202 907 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms