RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 KCNC1P48547 511 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 TDGF1P3P51864 188 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 HSD17B7P56937 341 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 FAM83EQ2M2I3 478 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 FBXO48Q5FWF7 155 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 RPS19BP1Q86WX3 136 aaKnown RBP17.88■□□□□ 0.45
COL7A1-207ENST00000467985 ZGRF1Q86YA3 2104 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 ZNF595Q8IYB9 648 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 SRFBP1Q8NEF9 429 aaKnown RBP17.88■□□□□ 0.45
COL7A1-207ENST00000467985 RHEBL1Q8TAI7 183 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 UBTD2Q8WUN7 234 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 EXT2Q93063 718 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 ESAMQ96AP7 390 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 QRFPRQ96P65 431 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 SERINC2Q96SA4 455 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 ROGDIQ9GZN7 287 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 OPTCQ9UBM4 332 aa17.88■□□□□ 0.45
COL7A1-207ENST00000467985 MTRF1LQ9UGC7 380 aaKnown RBP17.88■□□□□ 0.45
COL7A1-207ENST00000467985 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.88■□□□□ 0.45
COL7A1-207ENST00000467985 ZNF490Q9ULM2 529 aaPredicted RBP17.88■□□□□ 0.45
COL7A1-207ENST00000467985 V9GYY5 206 aaPredicted RBP17.88■□□□□ 0.45
COL7A1-207ENST00000467985 A0A1B0GUH1 482 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 GABRR3A8MPY1 467 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 SUPT3HB4E1H0 165 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 FAM227AF5H4B4 570 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 LRRTM2O43300 516 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 SUPT3HO75486 399 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 STSP08842 583 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 SERPINB1P30740 379 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 CD96P40200 585 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 PLA2G16P53816 162 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 MTTPP55157 894 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 RAB38P57729 211 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 DLG1Q12959 904 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 CHIT1Q13231 466 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 RUNX2Q13950 521 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 E2F2Q14209 437 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 OR1C1Q15619 314 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 ABHD17CQ6PCB6 329 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 MAMDC2Q7Z304 686 aaPredicted RBP17.87■□□□□ 0.45
COL7A1-207ENST00000467985 VN1R5Q7Z5H4 357 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 TMEM178AQ8NBL3 297 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 MDS2Q8NDY4 140 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 KCNC2Q96PR1 638 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 ATOH8Q96SQ7 321 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 NPAS2Q99743 824 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 COPS7BQ9H9Q2 264 aaPredicted RBP17.87■□□□□ 0.45
COL7A1-207ENST00000467985 NECTIN3Q9NQS3 549 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 IGSF5Q9NSI5 407 aa17.87■□□□□ 0.45
COL7A1-207ENST00000467985 K7EPI3 171 aa17.86■□□□□ 0.45
COL7A1-207ENST00000467985 PRAMEF4O60810 478 aa17.86■□□□□ 0.45
COL7A1-207ENST00000467985 MLYCDO95822 493 aa17.86■□□□□ 0.45
COL7A1-207ENST00000467985 EEF1DP29692 281 aaKnown RBP17.86■□□□□ 0.45
COL7A1-207ENST00000467985 OC90Q02509 493 aaPredicted RBP17.86■□□□□ 0.45
COL7A1-207ENST00000467985 PCDH1Q08174 1060 aa17.86■□□□□ 0.45
COL7A1-207ENST00000467985 EFTUD2Q15029 972 aaKnown RBP eCLIP17.86■□□□□ 0.456e-7■■■■□ 21.4
COL7A1-207ENST00000467985 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.86■□□□□ 0.45
COL7A1-207ENST00000467985 MROH9Q5TGP6 573 aa17.86■□□□□ 0.45
COL7A1-207ENST00000467985 PRAMEF9Q5VWM5 478 aa17.86■□□□□ 0.45
COL7A1-207ENST00000467985 GFRALQ6UXV0 394 aa17.86■□□□□ 0.45
COL7A1-207ENST00000467985 RELL1Q8IUW5 271 aa17.86■□□□□ 0.45
COL7A1-207ENST00000467985 SCUBE1Q8IWY4 988 aa17.86■□□□□ 0.45
COL7A1-207ENST00000467985 NFAM1Q8NET5 270 aaPredicted RBP17.86■□□□□ 0.45
COL7A1-207ENST00000467985 SIGLEC12Q96PQ1 595 aa17.86■□□□□ 0.45
COL7A1-207ENST00000467985 DEFB126Q9BYW3 111 aa17.86■□□□□ 0.45
COL7A1-207ENST00000467985 CDCP1Q9H5V8 836 aa17.86■□□□□ 0.45
COL7A1-207ENST00000467985 ACSS3Q9H6R3 686 aa17.86■□□□□ 0.45
COL7A1-207ENST00000467985 PRTFDC1Q9NRG1 225 aa17.86■□□□□ 0.45
COL7A1-207ENST00000467985 DIDO1Q9BTC0 2240 aaKnown RBP17.86■□□□□ 0.45
COL7A1-207ENST00000467985 A0A0G2JN53 185 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 A1L4Q6 167 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 UBXN8O00124 270 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 TBX6O95947 436 aaPredicted RBP17.85■□□□□ 0.45
COL7A1-207ENST00000467985 EPB42P16452 691 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 EPORP19235 508 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 CD22P20273 847 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 SLC13A2Q13183 592 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 ACAP2Q15057 778 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 TMEM35AQ53FP2 167 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 KLC3Q6P597 504 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 ARMC10Q8N2F6 343 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 KIF2BQ8N4N8 673 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 B3GNT7Q8NFL0 401 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 NXNL1Q96CM4 212 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 SCMH1Q96GD3 660 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 TBCDQ9BTW9 1192 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 PRM3Q9NNZ6 103 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 SNX15Q9NRS6 342 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 ANKRD10Q9NXR5 420 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 SEC14L3Q9UDX4 400 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 ADGRE2Q9UHX3 823 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 DAPP1Q9UN19 280 aa17.85■□□□□ 0.45
COL7A1-207ENST00000467985 FCHO1O14526 889 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 MAN1A2O60476 641 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 C2P06681 752 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 GMPRP36959 345 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 MSH2P43246 934 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 SERPINB8P50452 374 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 CLCN2P51788 898 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 LIM2P55344 173 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms