RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 ADNPQ9H2P0 1102 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 ELOVL6Q9H5J4 265 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 KCMF1Q9P0J7 381 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 LAMA5O15230 3695 aa12.84□□□□□ -0.35
SSBP1-206ENST00000467681 LOC102723996A0A087X1L8 192 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 A0A1W2PQ72 361 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 H3BQF6 201 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 SAP18O00422 153 aaKnown RBP12.83□□□□□ -0.36
SSBP1-206ENST00000467681 RTCAO00442 366 aaKnown RBP12.83□□□□□ -0.36
SSBP1-206ENST00000467681 B4GALT2O60909 372 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 ETHE1O95571 254 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 KRT6AP02538 564 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 KRT6BP04259 564 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 ENO1P06733 434 aaKnown RBP12.83□□□□□ -0.36
SSBP1-206ENST00000467681 FAM87AP0C7U9 286 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 SFTPCP11686 197 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 H2AFXP16104 143 aaPredicted RBP12.83□□□□□ -0.36
SSBP1-206ENST00000467681 HIST1H1TP22492 207 aaPredicted RBP12.83□□□□□ -0.36
SSBP1-206ENST00000467681 BSGP35613 385 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 ETV4P43268 484 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 KRT6CP48668 564 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 CCL11P51671 97 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 EFNA3P52797 238 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 RHAGQ02094 409 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 ASPHQ12797 758 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 MINDY4Q4G0A6 757 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 DCAF10Q5QP82 559 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 ZNF793Q6ZN11 406 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 FRMD7Q6ZUT3 714 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 NDUFAF7Q7L592 441 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 CDYL2Q8N8U2 506 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 AGAP11Q8TF27 550 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 SELENOMQ8WWX9 145 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 METTL21AQ8WXB1 218 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 CNDP1Q96KN2 507 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 MESP1Q9BRJ9 268 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 TRIM55Q9BYV6 548 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 STMN4Q9H169 189 aaPredicted RBP12.83□□□□□ -0.36
SSBP1-206ENST00000467681 DDX31Q9H8H2 851 aaKnown RBP12.83□□□□□ -0.36
SSBP1-206ENST00000467681 TMBIM4Q9HC24 238 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 LYRM4Q9HD34 91 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 MID1IP1Q9NPA3 183 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 ATP13A2Q9NQ11 1180 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 FARSBQ9NSD9 589 aaKnown RBP12.83□□□□□ -0.36
SSBP1-206ENST00000467681 FBXL4Q9UKA2 621 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 DAPP1Q9UN19 280 aa12.83□□□□□ -0.36
SSBP1-206ENST00000467681 TLN1Q9Y490 2541 aaKnown RBP12.82□□□□□ -0.36
SSBP1-206ENST00000467681 PSMD12O00232 456 aaPredicted RBP12.82□□□□□ -0.36
SSBP1-206ENST00000467681 CYR61O00622 381 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 PLPP1O14494 284 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 PRMT3O60678 531 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 ULK1O75385 1050 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 CEACAM4O75871 244 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 SEMA3DO95025 777 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 PDYNP01213 254 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 BPGMP07738 259 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 C8orf89P0DMQ9 161 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 ACPPP15309 386 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 JAK1P23458 1154 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 CERS1P27544 350 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 TSFMP43897 325 aaKnown RBP12.82□□□□□ -0.36
SSBP1-206ENST00000467681 RAP1GDS1P52306 607 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 LIM2P55344 173 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 SOX8P57073 446 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 RAB38P57729 211 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 BTG2P78543 158 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 CHAF1BQ13112 559 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 SLAMF1Q13291 335 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 MPP2Q14168 576 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 RCN2Q14257 317 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 NSDHLQ15738 373 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 SOWAHCQ53LP3 525 aaPredicted RBP12.82□□□□□ -0.36
SSBP1-206ENST00000467681 MFSD4BQ5TF39 518 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 CPZQ66K79 652 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 FAAH2Q6GMR7 532 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 ZCCHC7Q8N3Z6 543 aaKnown RBP12.82□□□□□ -0.36
SSBP1-206ENST00000467681 C8orf44Q96CB5 159 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 BBC3Q96PG8 261 aaPredicted RBP12.82□□□□□ -0.36
SSBP1-206ENST00000467681 TRMOQ9BU70 441 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 SORBS1Q9BX66 1292 aaKnown RBP12.82□□□□□ -0.36
SSBP1-206ENST00000467681 ZNF717Q9BY31 904 aaPredicted RBP12.82□□□□□ -0.36
SSBP1-206ENST00000467681 COPS7BQ9H9Q2 264 aaPredicted RBP12.82□□□□□ -0.36
SSBP1-206ENST00000467681 BRF2Q9HAW0 419 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 NMRK1Q9NWW6 199 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 AHSPQ9NZD4 102 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 TUBD1Q9UJT1 453 aa12.82□□□□□ -0.36
SSBP1-206ENST00000467681 DOCK10Q96BY6 2186 aa12.81□□□□□ -0.36
SSBP1-206ENST00000467681 PIEZO2Q9H5I5 2752 aa12.81□□□□□ -0.36
SSBP1-206ENST00000467681 CHD6Q8TD26 2715 aa12.81□□□□□ -0.36
SSBP1-206ENST00000467681 ZFHX4Q86UP3 3567 aa12.81□□□□□ -0.36
SSBP1-206ENST00000467681 MASP2O00187 686 aa12.81□□□□□ -0.36
SSBP1-206ENST00000467681 CLDN4O14493 209 aa12.81□□□□□ -0.36
SSBP1-206ENST00000467681 TM9SF1O15321 606 aa12.81□□□□□ -0.36
SSBP1-206ENST00000467681 CDC123O75794 336 aaPredicted RBP12.81□□□□□ -0.36
SSBP1-206ENST00000467681 DNAJB5O75953 348 aa12.81□□□□□ -0.36
SSBP1-206ENST00000467681 HPP00738 406 aa12.81□□□□□ -0.36
SSBP1-206ENST00000467681 DHRS4L1P0CG22 281 aa12.81□□□□□ -0.36
SSBP1-206ENST00000467681 HSD3B1P14060 373 aa12.81□□□□□ -0.36
SSBP1-206ENST00000467681 HSD3B2P26439 372 aa12.81□□□□□ -0.36
SSBP1-206ENST00000467681 HMOX2P30519 316 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms