RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-209	ENST00000467081	PSMB7	Q99436	277 aa		4.39	□□□□□ -1.71
CCNL1-209	ENST00000467081	MLPH	Q9BV36	600 aa	Predicted RBP	4.39	□□□□□ -1.71
CCNL1-209	ENST00000467081	ACAT2	Q9BWD1	397 aa		4.39	□□□□□ -1.71
CCNL1-209	ENST00000467081	PAPOLG	Q9BWT3	736 aa	Known RBP	4.39	□□□□□ -1.71
CCNL1-209	ENST00000467081	CACNG6	Q9BXT2	260 aa		4.39	□□□□□ -1.71
CCNL1-209	ENST00000467081	RPF1	Q9H9Y2	349 aa	Known RBP	4.39	□□□□□ -1.71
CCNL1-209	ENST00000467081	IL1RAP	Q9NPH3	570 aa		4.39	□□□□□ -1.71
CCNL1-209	ENST00000467081	PILRA	Q9UKJ1	303 aa		4.39	□□□□□ -1.71
CCNL1-209	ENST00000467081	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.39	□□□□□ -1.71
CCNL1-209	ENST00000467081	GON4L	Q3T8J9	2241 aa		4.39	□□□□□ -1.71
CCNL1-209	ENST00000467081	ZNF646	O15015	1829 aa	Predicted RBP	4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	IGLV3-10	A0A075B6K4	115 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081		A0A1W2PRV1	198 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	ARHGEF33	A8MVX0	844 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	PDHX	O00330	501 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	PPIP5K2	O43314	1243 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	SELENOF	O60613	162 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	PGLS	O95336	258 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	HP	P00738	406 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	MT-ND2	P03891	347 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	ADORA3	P0DMS8	318 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	GP9	P14770	177 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	PSMB4	P28070	264 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	NAGLU	P54802	743 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	NME5	P56597	212 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	EIPR1	Q53HC9	387 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	GLRA4	Q5JXX5	417 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	FAM182A	Q5T1J6	154 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	SEL1L3	Q68CR1	1132 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	TRMT11	Q7Z4G4	463 aa	Known RBP	4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	COX8C	Q7Z4L0	72 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	TIGD4	Q8IY51	512 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	TEX26	Q8N6G2	289 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	DNASE1L2	Q92874	299 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	LURAP1	Q96LR2	239 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	CCDC43	Q96MW1	224 aa	Known RBP	4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	HNRNPAB	Q99729	332 aa	Known RBP	4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	C10orf88	Q9H8K7	445 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	SATB2	Q9UPW6	733 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	NCKAP1	Q9Y2A7	1128 aa		4.38	□□□□□ -1.71
CCNL1-209	ENST00000467081	OGT	O15294	1046 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	SIGLEC5	O15389	551 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	FLRT2	O43155	660 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	PHF1	O43189	567 aa	Predicted RBP	4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	ZNF749	O43361	778 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	GPRIN2	O60269	458 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	SIX3	O95343	332 aa	Predicted RBP	4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	MELTF	P08582	738 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	SOAT1	P35610	550 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	LRRC37A5P	Q49AS3	106 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	CASC4	Q6P4E1	433 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	TMEM270	Q6UE05	265 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	LINC00696	Q6ZRV3	163 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	GPR141	Q7Z602	305 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	CEACAM19	Q7Z692	300 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	ZC3H3	Q8IXZ2	948 aa	Known RBP	4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	DND1	Q8IYX4	353 aa	Known RBP	4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	ZPLD1	Q8TCW7	415 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	RIT1	Q92963	219 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	TEKT1	Q969V4	418 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	CCDC28B	Q9BUN5	200 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	SLC5A7	Q9GZV3	580 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	TMOD3	Q9NYL9	352 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	CNIH4	Q9P003	139 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	GMEB2	Q9UKD1	530 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	CDH7	Q9ULB5	785 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	KLK4	Q9Y5K2	254 aa		4.37	□□□□□ -1.71
CCNL1-209	ENST00000467081	LRRD1	A4D1F6	860 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	OOEP	A6NGQ2	149 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	YDJC	A8MPS7	323 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	NPIPA3	F8WFD2	350 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	SLC33A1	O00400	549 aa	Predicted RBP	4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	IFIT3	O14879	490 aa	Known RBP	4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	PGRMC2	O15173	223 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	TNFSF12	O43508	249 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	FCGR3B	O75015	233 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	NME6	O75414	186 aa	Predicted RBP	4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	GOT1	P17174	413 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	PTMS	P20962	102 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	CTNNA2	P26232	953 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	FEN1	P39748	380 aa	Known RBP	4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	KHK	P50053	298 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	FOLH1	Q04609	750 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	GRB14	Q14449	540 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	MLF2	Q15773	248 aa	Predicted RBP	4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	FAM46C	Q5VWP2	391 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	KCTD9	Q7L273	389 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	NCOA7	Q8NI08	942 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	OCR1	Q9BZK8	76 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	DPEP2	Q9H4A9	486 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	TMEM206	Q9H813	350 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	LMAN1L	Q9HAT1	526 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	AKAP7	Q9P0M2	348 aa	Predicted RBP	4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	LIPT1	Q9Y234	373 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	ACE	P12821	1306 aa		4.36	□□□□□ -1.71
CCNL1-209	ENST00000467081	FER1L5	A0AVI2	2057 aa		4.35	□□□□□ -1.71
CCNL1-209	ENST00000467081	C5orf52	A6NGY3	159 aa		4.35	□□□□□ -1.71
CCNL1-209	ENST00000467081	TCP10L2	B9ZVM9	353 aa		4.35	□□□□□ -1.71
CCNL1-209	ENST00000467081	CTDSPL	O15194	276 aa		4.35	□□□□□ -1.71
CCNL1-209	ENST00000467081	MLNR	O43193	412 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms