RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ATP6AP1LQ52LC2 224 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 SPDYAQ5MJ70 313 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 ARHGAP40Q5TG30 622 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 C1orf189Q5VU69 101 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 OGFOD2Q6N063 350 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 MRPL14Q6P1L8 145 aaKnown RBP14.37□□□□□ -0.11
NPHP4-205ENST00000466897 FAM198BQ6UWH4 519 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 OVCH1Q7RTY7 1134 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 DTWD1Q8N5C7 304 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 C1orf52Q8N6N3 182 aaKnown RBP14.37□□□□□ -0.11
NPHP4-205ENST00000466897 SNIP1Q8TAD8 396 aaKnown RBP14.37□□□□□ -0.11
NPHP4-205ENST00000466897 TUBGCP3Q96CW5 907 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 CHMP6Q96FZ7 201 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 OR1F2PQ96R84 312 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 TMEM121BQ9BXQ6 578 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-205ENST00000466897 MKKSQ9NPJ1 570 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-205ENST00000466897 PRDM9Q9NQV7 894 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 LYARQ9NX58 379 aaKnown RBP14.37□□□□□ -0.11
NPHP4-205ENST00000466897 MS4A12Q9NXJ0 267 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 ASIC5Q9NY37 505 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 PHF11Q9UIL8 331 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 NXT1Q9UKK6 140 aaKnown RBP14.37□□□□□ -0.11
NPHP4-205ENST00000466897 DAPP1Q9UN19 280 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 WBP11Q9Y2W2 641 aaKnown RBP14.37□□□□□ -0.11
NPHP4-205ENST00000466897 AKAP13Q12802 2813 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 A0A0G2JN53 185 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 ARHGAP10A1A4S6 786 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 BLACEA4D250 179 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 SRRM3A6NNA2 597 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-205ENST00000466897 C9J4A7 227 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 TERTO14746 1132 aaKnown RBP14.36□□□□□ -0.11
NPHP4-205ENST00000466897 PCDH7O60245 1069 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 EEDO75530 441 aaKnown RBP14.36□□□□□ -0.11
NPHP4-205ENST00000466897 CYC1P08574 325 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 VIMP08670 466 aaKnown RBP14.36□□□□□ -0.11
NPHP4-205ENST00000466897 CERS1P27544 350 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 PCBP4P57723 403 aaKnown RBP14.36□□□□□ -0.11
NPHP4-205ENST00000466897 RAE1P78406 368 aaKnown RBP14.36□□□□□ -0.11
NPHP4-205ENST00000466897 MAD2L1Q13257 205 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-205ENST00000466897 SLC9A5Q14940 896 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 NCF4Q15080 339 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 C6orf136Q5SQH8 315 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 EPGNQ6UW88 154 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 LARP4Q71RC2 724 aaKnown RBP eCLIP14.36□□□□□ -0.11
NPHP4-205ENST00000466897 MAVSQ7Z434 540 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 CA13Q8N1Q1 262 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 ACTRT2Q8TDY3 377 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 FGF11Q92914 225 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 MR1Q95460 341 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 NKD1Q969G9 470 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 COL26A1Q96A83 441 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 GPR87Q9BY21 358 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 TRIM55Q9BYV6 548 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 CHST8Q9H2A9 424 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 FGFR1OP2Q9NVK5 253 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 C14orf105Q9NVL8 296 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 KCMF1Q9P0J7 381 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 IFT80Q9P2H3 777 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-205ENST00000466897 ZNF282Q9UDV7 671 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-205ENST00000466897 MAU2Q9Y6X3 613 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 SPACA6W5XKT8 324 aa14.36□□□□□ -0.11
NPHP4-205ENST00000466897 NCOR2Q9Y618 2525 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 TEX51A0A1B0GUA7 166 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 ATP6AP2A0A1C7CYW4 349 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 VSTM2BA6NLU5 285 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 POLR3GO15318 223 aaPredicted RBP14.35□□□□□ -0.11
NPHP4-205ENST00000466897 CHST10O43529 356 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 TMPRSS11DO60235 418 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 GUCY1B2O75343 617 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 SEC22BO75396 215 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 ATP6AP2O75787 350 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 MYO1DO94832 1006 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 B3GALT4O96024 378 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 CAPNS1P04632 268 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 KLK1P06870 262 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 FAM58BPP0C7Q3 252 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 TROVE2P10155 538 aaKnown RBP eCLIP14.35□□□□□ -0.11
NPHP4-205ENST00000466897 RNH1P13489 461 aaKnown RBP14.35□□□□□ -0.11
NPHP4-205ENST00000466897 MAPK1P28482 360 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 MAPK12P53778 367 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 GYS2P54840 703 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 LIM2P55344 173 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 RAB38P57729 211 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 ERVK-8P63133 956 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 EMX2Q04743 252 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 SLAMF1Q13291 335 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 RUNX2Q13950 521 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 RFTN2Q52LD8 501 aaPredicted RBP14.35□□□□□ -0.11
NPHP4-205ENST00000466897 CCNYL2Q5T2Q4 361 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 NOXRED1Q6NXP6 359 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 CYP20A1Q6UW02 462 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 MTERF4Q7Z6M4 381 aaKnown RBP14.35□□□□□ -0.11
NPHP4-205ENST00000466897 CACNA2D3Q8IZS8 1091 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 METTL27Q8N6F8 245 aaPredicted RBP14.35□□□□□ -0.11
NPHP4-205ENST00000466897 OR51Q1Q8NH59 317 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.35□□□□□ -0.11
NPHP4-205ENST00000466897 SORBS1Q9BX66 1292 aaKnown RBP14.35□□□□□ -0.11
NPHP4-205ENST00000466897 AKTIPQ9H8T0 292 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 TRPC4Q9UBN4 977 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 ASB4Q9Y574 426 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms