RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 KRT15P19012 456 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 CD97P48960 835 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 MLLT10P55197 1068 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 SKP1P63208 163 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 TLE1Q04724 770 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 Q0VFX4 171 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 LAPTM5Q13571 262 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 PCOLCEQ15113 449 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 CPSF6Q16630 551 aaKnown RBP eCLIP9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 TNFAIP8L3Q5GJ75 292 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 GRHL2Q6ISB3 625 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 MED27Q6P2C8 311 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 BRICD5Q6PL45 260 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 ATG14Q6ZNE5 492 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 LINC00696Q6ZRV3 163 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 RETREG3Q86VR2 466 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 CYP4X1Q8N118 509 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 CA13Q8N1Q1 262 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 AFAP1L2Q8N4X5 818 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 SIRT6Q8N6T7 355 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 FAM47BQ8NA70 645 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 OR2W6PQ8NHA6 318 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 TBC1D20Q96BZ9 403 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 MTFMTQ96DP5 389 aaKnown RBP9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 MS4A6EQ96DS6 147 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 MTBPQ96DY7 904 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 CNDP1Q96KN2 507 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 NSUN5Q96P11 429 aaKnown RBP9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 SORBS1Q9BX66 1292 aaKnown RBP9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 TGIF2Q9GZN2 237 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 REXO4Q9GZR2 422 aaKnown RBP9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 EHD1Q9H4M9 534 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 PIEZO2Q9H5I5 2752 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 ZNF552Q9H707 407 aaPredicted RBP9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 NOL11Q9H8H0 719 aaKnown RBP9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 IPPKQ9H8X2 491 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 ZBTB20Q9HC78 741 aaPredicted RBP9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 SEMA4BQ9NPR2 832 aaPredicted RBP9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 TMEM216Q9P0N5 145 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 PTGFRNQ9P2B2 879 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 C19orf25Q9UFG5 118 aaPredicted RBP9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 ANAPC2Q9UJX6 822 aa9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 ZNF490Q9ULM2 529 aaPredicted RBP9.18□□□□□ -0.94
RTFDC1-205ENST00000466260 MYOCOSA0A1B0GUC4 107 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 A0A1W2PPM1 405 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 TLDC2A0PJX2 215 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 LRIT2A6NDA9 550 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 A8MT66 165 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 E2F3O00716 465 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 SUV39H1O43463 412 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 B3GALT2O43825 422 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 DPM1O60762 260 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 CLEC3AO75596 197 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 CEACAM4O75871 244 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 TBX6O95947 436 aaPredicted RBP9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 ALPPP05187 535 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 COL6A2P12110 1019 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 MAOAP21397 527 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 ST13P50502 369 aaKnown RBP9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 CCNG1P51959 295 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 CDH13P55290 713 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 RPS13P62277 151 aaKnown RBP9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 BTG2P78543 158 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 ABRAXAS2Q15018 415 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 PCBP2Q15366 365 aaKnown RBP eCLIP9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 NSDHLQ15738 373 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 BTBD16Q32M84 506 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 VWA5B1Q5TIE3 1220 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 TTC19Q6DKK2 380 aaPredicted RBP9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 NDUFAF7Q7L592 441 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 CPEB2Q7Z5Q1 589 aaKnown RBP9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 ANKRD37Q7Z713 158 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 OR2L5Q8NG80 312 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 OR7G3Q8NG95 312 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 OR52B6Q8NGF0 335 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 PRR7Q8TB68 274 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 BRIX1Q8TDN6 353 aaKnown RBP9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 ZBTB9Q96C00 473 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 PTCHD1Q96NR3 888 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 MTERF1Q99551 399 aaKnown RBP9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 USB1Q9BQ65 265 aaKnown RBP9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 MRPL57Q9BQC6 102 aaKnown RBP9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 MS4A8Q9BY19 250 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 LHPPQ9H008 270 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 MRPL46Q9H2W6 279 aaKnown RBP9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 OR51B5Q9H339 312 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 NT5DC2Q9H857 520 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 LANCL2Q9NS86 450 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 RIC8BQ9NVN3 520 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 RNF11Q9Y3C5 154 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 TNPO3Q9Y5L0 923 aaKnown RBP9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 CSAG2Q9Y5P2 127 aa9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 SPENQ96T58 3664 aaKnown RBP9.17□□□□□ -0.94
RTFDC1-205ENST00000466260 A0A088AWK7 358 aa9.16□□□□□ -0.94
RTFDC1-205ENST00000466260 CFAP73A6NFT4 308 aa9.16□□□□□ -0.94
RTFDC1-205ENST00000466260 TTLL8A6PVC2 850 aa9.16□□□□□ -0.94
RTFDC1-205ENST00000466260 J3QKU1 62 aa9.16□□□□□ -0.94
RTFDC1-205ENST00000466260 KLK8O60259 260 aa9.16□□□□□ -0.94
RTFDC1-205ENST00000466260 ZIC2O95409 532 aaPredicted RBP9.16□□□□□ -0.94
RTFDC1-205ENST00000466260 SBK3P0C264 359 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms