RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 CHRM5P08912 532 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-205ENST00000466192 F3P13726 295 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 NDUFS1P28331 727 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 KDELR2P33947 212 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 SHMT2P34897 504 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 RGNQ15493 299 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 NADK2Q4G0N4 442 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 KIAA1614Q5VZ46 1190 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 TTC33Q6PID6 262 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-205ENST00000466192 PAGE2Q7Z2X7 111 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 ADHFE1Q8IWW8 467 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 EID3Q8N140 333 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 ZCCHC7Q8N3Z6 543 aaKnown RBP17.4■□□□□ 0.38
COL9A3-205ENST00000466192 DRAXINQ8NBI3 349 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-205ENST00000466192 MAL2Q969L2 176 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 RGMAQ96B86 450 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 GPR174Q9BXC1 333 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 SMURF2Q9HAU4 748 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 MIEF1Q9NQG6 463 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 WSB2Q9NYS7 404 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-205ENST00000466192 OR6C2Q9NZP2 312 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 KLHL20Q9Y2M5 609 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 LRIT2A6NDA9 550 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 CHURC1-FNTBB4DL54 471 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 NOBOXO60393 691 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 E2F6O75461 281 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 ALBP02768 609 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 RABIFP47224 123 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 FAM180BQ6P0A1 224 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 SPESP1Q6UW49 350 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 ZDHHC21Q8IVQ6 265 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 SYNPOQ8N3V7 929 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 AMER3Q8N944 861 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 MACROD1Q9BQ69 325 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 TRIM4Q9C037 500 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 ABCG4Q9H172 646 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 TCEAL2Q9H3H9 227 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-205ENST00000466192 SYNPO2LQ9H987 977 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 CLK4Q9HAZ1 481 aaKnown RBP17.4■□□□□ 0.38
COL9A3-205ENST00000466192 KLF15Q9UIH9 416 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 PADI4Q9UM07 663 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 A0A0G2JN53 185 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 ISM1B1AKI9 464 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 TMPRSS11DO60235 418 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 PPIBP23284 216 aaKnown RBP17.39■□□□□ 0.37
COL9A3-205ENST00000466192 GRK3P35626 688 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 ZIC1Q15915 447 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.39■□□□□ 0.37
COL9A3-205ENST00000466192 VTCN1Q7Z7D3 282 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 TMEM179BQ7Z7N9 219 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 NUDT13Q86X67 352 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 NAGSQ8N159 534 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 TTLQ8NG68 377 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 POP5Q969H6 163 aaKnown RBP17.39■□□□□ 0.37
COL9A3-205ENST00000466192 KLHL31Q9H511 634 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 GPATCH2Q9NW75 528 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 RAPGEFL1Q9UHV5 662 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 DUSP12Q9UNI6 340 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 CORO2BQ9UQ03 480 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 COLQQ9Y215 455 aaPredicted RBP17.39■□□□□ 0.37
COL9A3-205ENST00000466192 DGKBQ9Y6T7 804 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 BTN3A3O00478 584 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 THRBP10828 461 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 DDCP20711 480 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 AQP1P29972 269 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 CMPK1P30085 196 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 CRATP43155 626 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 MVDP53602 400 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 PLA2G16P53816 162 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 CDH15P55291 814 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 ADARB1P78563 741 aaKnown RBP17.39■□□□□ 0.37
COL9A3-205ENST00000466192 HYAL2Q12891 473 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 PLCL1Q15111 1095 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 CNPY1Q3B7I2 92 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 ANKRD34AQ69YU3 496 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 SVOPLQ8N434 492 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 FAM160A2Q8N612 972 aaPredicted RBP17.39■□□□□ 0.37
COL9A3-205ENST00000466192 RLN3Q8WXF3 142 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 QRFPRQ96P65 431 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 TEFMQ96QE5 360 aaKnown RBP17.39■□□□□ 0.37
COL9A3-205ENST00000466192 SLC35A5Q9BS91 424 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 FAF1Q9UNN5 650 aaPredicted RBP17.39■□□□□ 0.37
COL9A3-205ENST00000466192 SLCO1B1Q9Y6L6 691 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 USP34Q70CQ2 3546 aa17.39■□□□□ 0.37
COL9A3-205ENST00000466192 SMIM31A0A1B0GVY4 71 aa17.38■□□□□ 0.37
COL9A3-205ENST00000466192 A0A1W2PRB8 838 aa17.38■□□□□ 0.37
COL9A3-205ENST00000466192 TOR1BO14657 336 aa17.38■□□□□ 0.37
COL9A3-205ENST00000466192 PRKACGP22612 351 aa17.38■□□□□ 0.37
COL9A3-205ENST00000466192 FZD5Q13467 585 aa17.38■□□□□ 0.37
COL9A3-205ENST00000466192 COX20Q5RI15 118 aa17.38■□□□□ 0.37
COL9A3-205ENST00000466192 OR4C11Q6IEV9 310 aa17.38■□□□□ 0.37
COL9A3-205ENST00000466192 ZNF425Q6IV72 752 aa17.38■□□□□ 0.37
COL9A3-205ENST00000466192 PATL1Q86TB9 770 aaKnown RBP17.38■□□□□ 0.37
COL9A3-205ENST00000466192 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.38■□□□□ 0.37
COL9A3-205ENST00000466192 TRIML2Q8N7C3 387 aa17.38■□□□□ 0.37
COL9A3-205ENST00000466192 TSTD1Q8NFU3 115 aa17.38■□□□□ 0.37
COL9A3-205ENST00000466192 OR5AK3PQ8NH89 298 aa17.38■□□□□ 0.37
COL9A3-205ENST00000466192 HLA-CQ95604 372 aa17.38■□□□□ 0.37
COL9A3-205ENST00000466192 C17orf62Q9BQA9 187 aa17.38■□□□□ 0.37
COL9A3-205ENST00000466192 SARGQ9BW04 601 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms