RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 GATA5Q9BWX5 397 aaPredicted RBP11.68□□□□□ -0.54
CHPF2-202ENST00000465601 ELOVL6Q9H5J4 265 aa11.68□□□□□ -0.54
CHPF2-202ENST00000465601 COPS7BQ9H9Q2 264 aaPredicted RBP11.68□□□□□ -0.54
CHPF2-202ENST00000465601 CLK4Q9HAZ1 481 aaKnown RBP11.68□□□□□ -0.54
CHPF2-202ENST00000465601 MID1IP1Q9NPA3 183 aa11.68□□□□□ -0.54
CHPF2-202ENST00000465601 LANCL2Q9NS86 450 aa11.68□□□□□ -0.54
CHPF2-202ENST00000465601 FARSBQ9NSD9 589 aaKnown RBP11.68□□□□□ -0.54
CHPF2-202ENST00000465601 TRPS1Q9UHF7 1281 aa11.68□□□□□ -0.54
CHPF2-202ENST00000465601 RP1L1Q8IWN7 2480 aaPredicted RBP11.67□□□□□ -0.54
CHPF2-202ENST00000465601 PRRC2CQ9Y520 2896 aaKnown RBP11.67□□□□□ -0.54
CHPF2-202ENST00000465601 A6NL46 340 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 AGPSO00116 658 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 PSMD12O00232 456 aaPredicted RBP11.67□□□□□ -0.54
CHPF2-202ENST00000465601 MANBAO00462 879 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 UBFD1O14562 309 aaKnown RBP11.67□□□□□ -0.54
CHPF2-202ENST00000465601 ATXN7O15265 892 aaPredicted RBP11.67□□□□□ -0.54
CHPF2-202ENST00000465601 PDYNP01213 254 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 MYZAPP0CAP1 466 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 IL10P22301 178 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 ATP5A1P25705 553 aaKnown RBP11.67□□□□□ -0.54
CHPF2-202ENST00000465601 RAP1GDS1P52306 607 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 PKNOX1P55347 436 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 BTG2P78543 158 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 TUBB8Q3ZCM7 444 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 OR4C11Q6IEV9 310 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 FRMD7Q6ZUT3 714 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 MED25Q71SY5 747 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 ACOT4Q8N9L9 421 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 TMEM102Q8N9M5 508 aaPredicted RBP11.67□□□□□ -0.54
CHPF2-202ENST00000465601 OR11G2Q8NGC1 345 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 METTL6Q8TCB7 284 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 SELENOMQ8WWX9 145 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 NACC2Q96BF6 587 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 WBP1Q96G27 269 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 FER1L6-AS2Q96M78 137 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 KCNA7Q96RP8 456 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 CENPKQ9BS16 269 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 NPLQ9BXD5 320 aaPredicted RBP11.67□□□□□ -0.54
CHPF2-202ENST00000465601 SHCBP1LQ9BZQ2 653 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 KCNK9Q9NPC2 374 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 PSD3Q9NYI0 1048 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 FBXL4Q9UKA2 621 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 SNX6Q9UNH7 406 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 STK38LQ9Y2H1 464 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 TIMM22Q9Y584 194 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 SMG1Q96Q15 3661 aaKnown RBP11.67□□□□□ -0.54
CHPF2-202ENST00000465601 NBASA2RRP1 2371 aa11.67□□□□□ -0.54
CHPF2-202ENST00000465601 CFAP46Q8IYW2 2715 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 PLPP1O14494 284 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 ESRRBO95718 433 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 ENO1P06733 434 aaKnown RBP11.66□□□□□ -0.54
CHPF2-202ENST00000465601 C8orf89P0DMQ9 161 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 ACPPP15309 386 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 HIST1H1TP22492 207 aaPredicted RBP11.66□□□□□ -0.54
CHPF2-202ENST00000465601 HMOX2P30519 316 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 ETV4P43268 484 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 SSR2P43308 183 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 RRADP55042 308 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 LIM2P55344 173 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 RAB38P57729 211 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 NAA20P61599 178 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 RHAGQ02094 409 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 EEF1A2Q05639 463 aaKnown RBP11.66□□□□□ -0.54
CHPF2-202ENST00000465601 CUL3Q13618 768 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 SOWAHCQ53LP3 525 aaPredicted RBP11.66□□□□□ -0.54
CHPF2-202ENST00000465601 DCAF10Q5QP82 559 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 TMEM205Q6UW68 189 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 LANCL3Q6ZV70 420 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 AMER2Q8N7J2 671 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 PLPP5Q8NEB5 264 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 AGAP11Q8TF27 550 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 METTL21AQ8WXB1 218 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 TSLPQ969D9 159 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 PTCHD1Q96NR3 888 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 HBEGFQ99075 208 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 SERPINI1Q99574 410 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 MAPKAP1Q9BPZ7 522 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 SLC29A3Q9BZD2 475 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 ROGDIQ9GZN7 287 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 TMBIM4Q9HC24 238 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 SSU72Q9NP77 194 aaKnown RBP11.66□□□□□ -0.54
CHPF2-202ENST00000465601 ARGLU1Q9NWB6 273 aaPredicted RBP11.66□□□□□ -0.54
CHPF2-202ENST00000465601 KCMF1Q9P0J7 381 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 PPT2Q9UMR5 302 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 DAPP1Q9UN19 280 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 ACTL7BQ9Y614 415 aa11.66□□□□□ -0.54
CHPF2-202ENST00000465601 IGHV3-20A0A0C4DH32 117 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 WDR91A4D1P6 747 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 GOLGA6L10A6NI86 522 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 PRMT3O60678 531 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 ULK1O75385 1050 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 EEDO75530 441 aaKnown RBP11.65□□□□□ -0.54
CHPF2-202ENST00000465601 SCELO95171 688 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 KRT6AP02538 564 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 KRT6BP04259 564 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 BPGMP07738 259 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 COX6A1P12074 109 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 H2AFXP16104 143 aaPredicted RBP11.65□□□□□ -0.54
CHPF2-202ENST00000465601 JAK1P23458 1154 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 SERPINB3P29508 390 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms