RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 KCNK13Q9HB14 408 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 RAB9BQ9NP90 201 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 RPS10P5Q9NQ39 176 aa4.75□□□□□ -1.65
PTCD3-205ENST00000464541 ARMCX3Q9UH62 379 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-205ENST00000464541 HBS1LQ9Y450 684 aaKnown RBP4.75□□□□□ -1.65
PTCD3-205ENST00000464541 OGTO15294 1046 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 ST8SIA3O43173 380 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 SUPT20HL2P0C7V6 817 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 PRELPP51888 382 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 RIDAP52758 137 aaKnown RBP4.74□□□□□ -1.65
PTCD3-205ENST00000464541 BTG1P62324 171 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 AKAP17AQ02040 695 aaKnown RBP4.74□□□□□ -1.65
PTCD3-205ENST00000464541 ARHGAP1Q07960 439 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 COX10Q12887 443 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 GPR50Q13585 617 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 KRT71Q3SY84 523 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 RFTN2Q52LD8 501 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-205ENST00000464541 HECTD3Q5T447 861 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 ZNF776Q68DI1 518 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-205ENST00000464541 PM20D1Q6GTS8 502 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-205ENST00000464541 SHQ1Q6PI26 577 aaKnown RBP4.74□□□□□ -1.65
PTCD3-205ENST00000464541 C17orf107Q6ZR85 190 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 SLC39A11Q8N1S5 342 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 SLC43A2Q8N370 569 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 NKAIN3Q8N8D7 197 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 OR13C5Q8NGS8 318 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 PUS3Q9BZE2 481 aaKnown RBP4.74□□□□□ -1.65
PTCD3-205ENST00000464541 MOB1AQ9H8S9 216 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 IL1RAPQ9NPH3 570 aa4.74□□□□□ -1.65
PTCD3-205ENST00000464541 MRPL17Q9NRX2 175 aaKnown RBP4.74□□□□□ -1.65
PTCD3-205ENST00000464541 BCLAF3A2AJT9 711 aaKnown RBP4.73□□□□□ -1.65
PTCD3-205ENST00000464541 PDHXO00330 501 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 SRSF10O75494 262 aaKnown RBP4.73□□□□□ -1.65
PTCD3-205ENST00000464541 ITIH1P19827 911 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 NDUFV3P56181 108 aaKnown RBP4.73□□□□□ -1.65
PTCD3-205ENST00000464541 EVCP57679 992 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 SLC3A1Q07837 685 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 CEACAM7Q14002 265 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 MEP1BQ16820 701 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 ZNF789Q5FWF6 425 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 NHSL2Q5HYW2 709 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 ZNF774Q6NX45 483 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 FAM43BQ6ZT52 329 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-205ENST00000464541 OR4N5Q8IXE1 308 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-205ENST00000464541 OR7G3Q8NG95 312 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 OR6F1Q8NGZ6 308 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 C8orf46Q8TAG6 207 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 SSC4DQ8WTU2 575 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 SEPT8Q92599 483 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 SLC35C1Q96A29 364 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 BPIFA2Q96DR5 249 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 IDI2Q9BXS1 227 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 SRD5A3Q9H8P0 318 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 TMEM161AQ9NX61 479 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 DNAJB9Q9UBS3 223 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 FBXL5Q9UKA1 691 aa4.73□□□□□ -1.65
PTCD3-205ENST00000464541 A8MU76 341 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 M0R296 226 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 P2RX6O15547 441 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 BCL2L11O43521 198 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 LETM1O95202 739 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-205ENST00000464541 SLU7O95391 586 aaKnown RBP4.72□□□□□ -1.65
PTCD3-205ENST00000464541 C8orf89P0DMQ9 161 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 LMO2P25791 158 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 ATP4BP51164 291 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 ROR1Q01973 937 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 KNOP1Q1ED39 458 aaKnown RBP4.72□□□□□ -1.65
PTCD3-205ENST00000464541 IQCCQ4KMZ1 466 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 AGAP6Q5VW22 663 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 Q71RC1 249 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-205ENST00000464541 TMUB2Q71RG4 321 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 SLC25A42Q86VD7 318 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 NLRP14Q86W24 1093 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 MARCH9Q86YJ5 346 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 C4orf32Q8N8J7 132 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 CSNK1G2-AS1Q8NCQ2 148 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 KIAA0895Q8NCT3 520 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 SAP25Q8TEE9 199 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 ALKBH3Q96Q83 286 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-205ENST00000464541 TMEM206Q9H813 350 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 NMUR1Q9HB89 426 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 AUP1Q9Y679 476 aa4.72□□□□□ -1.65
PTCD3-205ENST00000464541 FAM149AA5PLN7 773 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 K7EQG2 157 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 ACKR3P25106 362 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 BACE1P56817 501 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 C3AR1Q16581 482 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 TYSND1Q2T9J0 566 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 ANKRD20A4Q4UJ75 823 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 ANKRD20A8PQ5CZ79 823 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 ANKRD20A2Q5SQ80 823 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 ANKRD20A1Q5TYW2 823 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 ANKRD20A3Q5VUR7 823 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 KCNMB4Q86W47 210 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 SMPDL3AQ92484 453 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 C1orf147Q96MC9 270 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-205ENST00000464541 ZNF577Q9BSK1 485 aa4.71□□□□□ -1.66
PTCD3-205ENST00000464541 RBM24Q9BX46 236 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms