RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 EEF1DP29692 281 aaKnown RBP12.17□□□□□ -0.46
XRN1-203ENST00000463916 LIM2P55344 173 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 ACTN3Q08043 901 aaPredicted RBP12.17□□□□□ -0.46
XRN1-203ENST00000463916 TEX35Q5T0J7 233 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 RPS27LQ71UM5 84 aaKnown RBP12.17□□□□□ -0.46
XRN1-203ENST00000463916 MYLK4Q86YV6 388 aaPredicted RBP12.17□□□□□ -0.46
XRN1-203ENST00000463916 CYP4X1Q8N118 509 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 EFCAB3Q8N7B9 438 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 OR52B6Q8NGF0 335 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 HUS1BQ8NHY5 278 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 SCYL1Q96KG9 808 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 NSUN5Q96P11 429 aaKnown RBP12.17□□□□□ -0.46
XRN1-203ENST00000463916 CDK15Q96Q40 435 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 CSF3RQ99062 836 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 MTERF1Q99551 399 aaKnown RBP12.17□□□□□ -0.46
XRN1-203ENST00000463916 LPAR4Q99677 370 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 SORBS1Q9BX66 1292 aaKnown RBP12.17□□□□□ -0.46
XRN1-203ENST00000463916 NPLQ9BXD5 320 aaPredicted RBP12.17□□□□□ -0.46
XRN1-203ENST00000463916 OR51B5Q9H339 312 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 ZBTB26Q9HCK0 441 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 PRDM9Q9NQV7 894 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 KCMF1Q9P0J7 381 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 MAP10Q9P2G4 905 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 RNF11Q9Y3C5 154 aa12.17□□□□□ -0.46
XRN1-203ENST00000463916 TCRBV16S1A1N1A0A5B0 115 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 FOXO6A8MYZ6 492 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 B3GALT2O43825 422 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 WDPCPO95876 746 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 PPP2R1BP30154 601 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 MTTPP55157 894 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 SLC26A5P58743 744 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 DDX39BQ13838 428 aaKnown RBP12.16□□□□□ -0.46
XRN1-203ENST00000463916 ZNF169Q14929 603 aaPredicted RBP12.16□□□□□ -0.46
XRN1-203ENST00000463916 FAM219BQ5XKK7 198 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 H3F3CQ6NXT2 135 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 TIFABQ6ZNK6 161 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 KIF2BQ8N4N8 673 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 FAM47BQ8NA70 645 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 HAS2Q92819 552 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 SERINC2Q96SA4 455 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 BARD1Q99728 777 aaKnown RBP12.16□□□□□ -0.46
XRN1-203ENST00000463916 NOL11Q9H8H0 719 aaKnown RBP12.16□□□□□ -0.46
XRN1-203ENST00000463916 ACTR8Q9H981 624 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 MMP25Q9NPA2 562 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 STMN3Q9NZ72 180 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 DAPP1Q9UN19 280 aa12.16□□□□□ -0.46
XRN1-203ENST00000463916 TNPO3Q9Y5L0 923 aaKnown RBP12.16□□□□□ -0.46
XRN1-203ENST00000463916 A0A1B0GTL3 188 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 A8MUA0 341 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 VPS4BO75351 444 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 SHBGP04278 402 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 PIK3CGP48736 1102 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 TNFSF10P50591 281 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 NEK2P51955 445 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 RAB38P57729 211 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 ARG2P78540 354 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 ZNF33BQ06732 778 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 MRPL49Q13405 166 aaKnown RBP12.15□□□□□ -0.46
XRN1-203ENST00000463916 TLR1Q15399 786 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 CPSF6Q16630 551 aaKnown RBP eCLIP12.15□□□□□ -0.46
XRN1-203ENST00000463916 TSNAXIP1Q2TAA8 658 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 LIPJQ5W064 366 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 ATCAYQ86WG3 371 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 SCUBE1Q8IWY4 988 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 GALNT11Q8NCW6 608 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 M1APQ8TC57 530 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 MZB1Q8WU39 189 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 UBE2E3Q969T4 207 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 KCNC2Q96PR1 638 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 MRPL57Q9BQC6 102 aaKnown RBP12.15□□□□□ -0.46
XRN1-203ENST00000463916 KCNK13Q9HB14 408 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 TMEM216Q9P0N5 145 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 PCTPQ9UKL6 214 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 VPS4AQ9UN37 437 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 COPG1Q9Y678 874 aaKnown RBP12.15□□□□□ -0.46
XRN1-203ENST00000463916 MYOCOSA0A1B0GUC4 107 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 H0YIV9 168 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 GOLGA8RI6L899 631 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 PPP6CO00743 305 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 ATP5A1P25705 553 aaKnown RBP12.15□□□□□ -0.46
XRN1-203ENST00000463916 EXT1Q16394 746 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 ACER2Q5QJU3 275 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 DEPDC1Q5TB30 811 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 ABHD17BQ5VST6 288 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 KHDRBS2Q5VWX1 349 aaKnown RBP12.15□□□□□ -0.46
XRN1-203ENST00000463916 ACOT4Q8N9L9 421 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 EIF1ADQ8N9N8 165 aaKnown RBP12.15□□□□□ -0.46
XRN1-203ENST00000463916 L3MBTL4Q8NA19 623 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 NFAM1Q8NET5 270 aaPredicted RBP12.15□□□□□ -0.46
XRN1-203ENST00000463916 OR1N1Q8NGS0 311 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 ELP5Q8TE02 316 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 MAPKAP1Q9BPZ7 522 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 MRPL46Q9H2W6 279 aaKnown RBP12.15□□□□□ -0.46
XRN1-203ENST00000463916 ANKZF1Q9H8Y5 726 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 DMRT3Q9NQL9 472 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 TBK1Q9UHD2 729 aa12.15□□□□□ -0.46
XRN1-203ENST00000463916 A0A088AWK7 358 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 DYTNA2CJ06 578 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 CLEC18AA5D8T8 446 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 STX16-NPEPL1H3BU86 382 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms