RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 FAM109AQ8N4B1 249 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 WFDC11Q8NEX6 87 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 SNF8Q96H20 258 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 PDLIM2Q96JY6 352 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 EXO5Q9H790 373 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 LIN28AQ9H9Z2 209 aaKnown RBP13.44□□□□□ -0.26
SMC1A-204ENST00000463684 IL1RL2Q9HB29 575 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 TRMT6Q9UJA5 497 aaKnown RBP13.44□□□□□ -0.26
SMC1A-204ENST00000463684 MMACHCQ9Y4U1 282 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 ACANP16112 2415 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 ABCA4P78363 2273 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 ATP6AP2A0A1C7CYW4 349 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 MAGEB16A2A368 324 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 HSPB2A8KAH6 182 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 G3V3Y1 287 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 ATP6AP2O75787 350 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 OR6B1O95007 311 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 F7P08709 466 aaPredicted RBP13.43□□□□□ -0.26
SMC1A-204ENST00000463684 TPSB2P20231 275 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 AHRP35869 848 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 SP140Q13342 867 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 CSHL1Q14406 222 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 TPSAB1Q15661 275 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 HSPB2Q16082 182 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 CCNG2Q16589 344 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 PHKG1Q16816 387 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 XKR6Q5GH73 641 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 DUPD1Q68J44 220 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 C16orf47Q6ZP98 133 aaPredicted RBP13.43□□□□□ -0.26
SMC1A-204ENST00000463684 TMEM251Q8N6I4 163 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 TRPV3Q8NET8 790 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 EEF1AKMT1Q8WVE0 214 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 SLCO2A1Q92959 643 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 TSPY26PQ9H489 355 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 DMRT3Q9NQL9 472 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 MYOTQ9UBF9 498 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 ZNF223Q9UK11 482 aaPredicted RBP13.43□□□□□ -0.26
SMC1A-204ENST00000463684 PPIEQ9UNP9 301 aaKnown RBP13.43□□□□□ -0.26
SMC1A-204ENST00000463684 LIPGQ9Y5X9 500 aa13.43□□□□□ -0.26
SMC1A-204ENST00000463684 FAM171A2A8MVW0 826 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 WWP2O00308 870 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 CLDN4O14493 209 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 PRKNO60260 465 aaPredicted RBP13.42□□□□□ -0.26
SMC1A-204ENST00000463684 SOX3P41225 446 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 SCTRP47872 440 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 GPR143P51810 404 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 BMPR2Q13873 1038 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 DAZAP2Q15038 168 aaPredicted RBP13.42□□□□□ -0.26
SMC1A-204ENST00000463684 ZNF750Q32MQ0 723 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 TMEM198Q66K66 360 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 RAD9BQ6WBX8 426 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 RTL4Q6ZR62 310 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 FAM47EQ6ZV65 393 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 CA13Q8N1Q1 262 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 MYO1HQ8N1T3 1032 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 ZNF669Q96BR6 464 aaPredicted RBP13.42□□□□□ -0.26
SMC1A-204ENST00000463684 PYCR2Q96C36 320 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 CNPPD1Q9BV87 410 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 NEUROD4Q9HD90 331 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 CBLCQ9ULV8 474 aa13.42□□□□□ -0.26
SMC1A-204ENST00000463684 PHF3Q92576 2039 aaKnown RBP13.41□□□□□ -0.26
SMC1A-204ENST00000463684 TRGV5A0A0B4J1U4 118 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 A0A0G2JMM0 328 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 A0A1W2PPB8 328 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 A0A1W2PRS3 328 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 TCRBV7S3A2A0A539 114 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 KIR3DP1A8MWS1 328 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 DVL2O14641 736 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 HAUS5O94927 633 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 ATE1O95260 518 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 P04436 131 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 SMIM10L1P0DMW3 83 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 HOXC12P31275 282 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 TERF1P54274 439 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 HSD17B7P56937 341 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 SLC13A2Q13183 592 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 RBBP5Q15291 538 aaKnown RBP13.41□□□□□ -0.26
SMC1A-204ENST00000463684 BBS9Q3SYG4 887 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 CATSPEREQ5SY80 951 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 DRICH1Q6PGQ1 229 aaPredicted RBP13.41□□□□□ -0.26
SMC1A-204ENST00000463684 HSDL2Q6YN16 418 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 LMNTD2Q8IXW0 634 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 TMEM132CQ8N3T6 1108 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 GPATCH11Q8N954 259 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 OR56A3Q8NH54 315 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 CALML6Q8TD86 181 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 NUDT8Q8WV74 236 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 RNASE6Q93091 150 aaKnown RBP13.41□□□□□ -0.26
SMC1A-204ENST00000463684 SMIM10Q96HG1 83 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 FAR2Q96K12 515 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 RASL10BQ96S79 203 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 AARSD1Q9BTE6 412 aaKnown RBP13.41□□□□□ -0.26
SMC1A-204ENST00000463684 TRIM54Q9BYV2 358 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 KLHL31Q9H511 634 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 PRTFDC1Q9NRG1 225 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 SACM1LQ9NTJ5 587 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 ARL15Q9NXU5 204 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 FOXD3Q9UJU5 478 aaPredicted RBP13.41□□□□□ -0.26
SMC1A-204ENST00000463684 MAD1L1Q9Y6D9 718 aa13.41□□□□□ -0.26
SMC1A-204ENST00000463684 CLCA3PQ9Y6N3 262 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms