RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 STAG3L4Q8TBR4 150 aa19.21■□□□□ 0.67
PDLIM4-205ENST00000463615 UBTD2Q8WUN7 234 aa19.21■□□□□ 0.67
PDLIM4-205ENST00000463615 GPR137Q96N19 417 aa19.21■□□□□ 0.67
PDLIM4-205ENST00000463615 FRMD6Q96NE9 622 aa19.21■□□□□ 0.67
PDLIM4-205ENST00000463615 SERINC2Q96SA4 455 aa19.21■□□□□ 0.67
PDLIM4-205ENST00000463615 CD244Q9BZW8 370 aa19.21■□□□□ 0.67
PDLIM4-205ENST00000463615 REXO4Q9GZR2 422 aaKnown RBP19.21■□□□□ 0.67
PDLIM4-205ENST00000463615 NMRAL1Q9HBL8 299 aa19.21■□□□□ 0.67
PDLIM4-205ENST00000463615 ANKRD10Q9NXR5 420 aa19.21■□□□□ 0.67
PDLIM4-205ENST00000463615 CD274Q9NZQ7 290 aa19.21■□□□□ 0.67
PDLIM4-205ENST00000463615 LRFN1Q9P244 771 aa19.21■□□□□ 0.67
PDLIM4-205ENST00000463615 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.21■□□□□ 0.67
PDLIM4-205ENST00000463615 CLDN4O14493 209 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 CRABP2P29373 138 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 CYB561P49447 251 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 HLCSP50747 726 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 MTTPP55157 894 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 OC90Q02509 493 aaPredicted RBP19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 XKR6Q5GH73 641 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 PAGE2BQ5JRK9 111 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 ZNF468Q5VIY5 522 aaPredicted RBP19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 MTFR2Q6P444 385 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 TRIM40Q6P9F5 258 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 SIAH3Q8IW03 269 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 ESAMQ96AP7 390 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 ATOH8Q96SQ7 321 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 HES7Q9BYE0 225 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 PRTFDC1Q9NRG1 225 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 NUDT4Q9NZJ9 180 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 RNF112Q9ULX5 631 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 DAPP1Q9UN19 280 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 ENTPD4Q9Y227 616 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 MRPS33Q9Y291 106 aaKnown RBP19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 ZNF835Q9Y2P0 537 aa19.2■□□□□ 0.66
PDLIM4-205ENST00000463615 MYO7BQ6PIF6 2116 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 TGFBR3LH3BV60 316 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 CYR61O00622 381 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 NME2P1O60361 137 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 KERAO60938 352 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 SLC25A12O75746 678 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 WISP2O76076 250 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 NME2P22392 152 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 CLCN2P51788 898 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 TGM3Q08188 693 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 DLG1Q12959 904 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 RCN2Q14257 317 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 TRADDQ15628 312 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 SYT10Q6XYQ8 523 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 Q6ZPB1 254 aaPredicted RBP19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 GALNTL5Q7Z4T8 443 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 PPM1NQ8N819 430 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 SNX31Q8N9S9 440 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 FAM98AQ8NCA5 519 aaKnown RBP19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 TMEM52Q8NDY8 209 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 SRFBP1Q8NEF9 429 aaKnown RBP19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 FBF1Q8TES7 1133 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 CCT6BQ92526 530 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 DEFB126Q9BYW3 111 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 ROGDIQ9GZN7 287 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 PRDM7Q9NQW5 492 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 KLHL1Q9NR64 748 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 IGSF5Q9NSI5 407 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 CACNA1DQ01668 2161 aa19.19■□□□□ 0.66
PDLIM4-205ENST00000463615 FAM155BO75949 473 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 SCELO95171 688 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 S100BP04271 92 aaPredicted RBP19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 TFEBP19484 476 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 SERPINB1P30740 379 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 HNRNPFP52597 415 aaKnown RBP19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 PLA2G16P53816 162 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 LIM2P55344 173 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 ALDH6A1Q02252 535 aaKnown RBP19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 IRF8Q02556 426 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 CHIT1Q13231 466 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 ART3Q13508 389 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 HIST2H2ACQ16777 129 aaPredicted RBP19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 FBXO48Q5FWF7 155 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 HIST2H2AA3Q6FI13 130 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 ADNP2Q6IQ32 1131 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 CMC1Q7Z7K0 106 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 TICAM1Q8IUC6 712 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 LAS2Q8IYD9 372 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 RHEBL1Q8TAI7 183 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 ZNF473Q8WTR7 871 aaKnown RBP19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 ITLN2Q8WWU7 325 aaPredicted RBP19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 UBE2E3Q969T4 207 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 VMP1Q96GC9 406 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 ALG9Q9H6U8 611 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 LYRM4Q9HD34 91 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 ADAP2Q9NPF8 381 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 KCMF1Q9P0J7 381 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 SUCOQ9UBS9 1254 aaKnown RBP19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 ZNF223Q9UK11 482 aaPredicted RBP19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 ASB1Q9Y576 335 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 KLF2Q9Y5W3 355 aaPredicted RBP19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 CELSR2Q9HCU4 2923 aa19.18■□□□□ 0.66
PDLIM4-205ENST00000463615 TRGV8A0A0C4DH27 118 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 A0A0G2JN53 185 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 FCHO1O14526 889 aa19.17■□□□□ 0.66
PDLIM4-205ENST00000463615 SLC19A2O60779 497 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms