RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 MTTPP55157 894 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 HMGCS1Q01581 520 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 OCA2Q04671 838 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 RUNX2Q13950 521 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 UGT3A2Q3SY77 523 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 VWA2Q5GFL6 755 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 FAM69BQ5VUD6 431 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 TMEM151BQ8IW70 566 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 ZC3H7AQ8IWR0 971 aaKnown RBP11.15□□□□□ -0.62
CPNE1-221ENST00000462352 HOMEZQ8IX15 550 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 CA13Q8N1Q1 262 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 ZNF781Q8N8C0 355 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 ACOT4Q8N9L9 421 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 OR2Y1Q8NGV0 311 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 OR51Q1Q8NH59 317 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 DYDC1Q8WWB3 177 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 STARD8Q92502 1023 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 ZNF75CPQ92670 426 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-221ENST00000462352 MIEF2Q96C03 454 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 SLC45A3Q96JT2 553 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 SPSB2Q99619 263 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 NPLQ9BXD5 320 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-221ENST00000462352 ZNF717Q9BY31 904 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-221ENST00000462352 TGIF2Q9GZN2 237 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 ACTL8Q9H568 366 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 C14orf105Q9NVL8 296 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 THAP1Q9NVV9 213 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 NMRK1Q9NWW6 199 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 VPS29Q9UBQ0 182 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 NXT1Q9UKK6 140 aaKnown RBP11.15□□□□□ -0.62
CPNE1-221ENST00000462352 TCFL5Q9UL49 500 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-221ENST00000462352 PADI2Q9Y2J8 665 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 PTRH2Q9Y3E5 179 aaKnown RBP11.15□□□□□ -0.62
CPNE1-221ENST00000462352 RAP2CQ9Y3L5 183 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 DNAJC15Q9Y5T4 150 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 DMXL2Q8TDJ6 3036 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 LAMA5O15230 3695 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 KLF11O14901 512 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 EFSO43281 561 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 EEDO75530 441 aaKnown RBP11.14□□□□□ -0.63
CPNE1-221ENST00000462352 JRKO75564 520 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 FOLR3P41439 243 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 KLC1Q07866 573 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 TBL3Q12788 808 aaKnown RBP11.14□□□□□ -0.63
CPNE1-221ENST00000462352 ERV3-1Q14264 604 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 IMPG1Q17R60 797 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 BROXQ5VW32 411 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 CCDC81Q6ZN84 652 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 RNF165Q6ZSG1 346 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 SHISA6Q6ZSJ9 500 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 TRIM46Q7Z4K8 759 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 NUDT13Q86X67 352 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 PRSS58Q8IYP2 241 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 METTL4Q8N3J2 472 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 ZCCHC7Q8N3Z6 543 aaKnown RBP11.14□□□□□ -0.63
CPNE1-221ENST00000462352 TWIST2Q8WVJ9 160 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 PEX11GQ96HA9 241 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 RBCK1Q9BYM8 510 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 ILKAPQ9H0C8 392 aaPredicted RBP11.14□□□□□ -0.63
CPNE1-221ENST00000462352 TUBB1Q9H4B7 451 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 SOX17Q9H6I2 414 aaPredicted RBP11.14□□□□□ -0.63
CPNE1-221ENST00000462352 AHSPQ9NZD4 102 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 HAO1Q9UJM8 370 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 DAPP1Q9UN19 280 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 PTGDR2Q9Y5Y4 395 aa11.14□□□□□ -0.63
CPNE1-221ENST00000462352 MAP1BP46821 2468 aaKnown RBP11.13□□□□□ -0.63
CPNE1-221ENST00000462352 A0A0A6YYD5 115 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 SLC28A1O00337 649 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 PIP5K1BO14986 540 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 SKAP2O75563 359 aaPredicted RBP11.13□□□□□ -0.63
CPNE1-221ENST00000462352 CREG1O75629 220 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 BMP10O95393 424 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 GBAP04062 536 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 UMODP07911 640 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 FHP07954 510 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 LINC00032P0C843 101 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 RNH1P13489 461 aaKnown RBP11.13□□□□□ -0.63
CPNE1-221ENST00000462352 IL10P22301 178 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 TPP2P29144 1249 aaPredicted RBP11.13□□□□□ -0.63
CPNE1-221ENST00000462352 RPL14P50914 215 aaKnown RBP11.13□□□□□ -0.63
CPNE1-221ENST00000462352 UCNP55089 124 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 LIM2P55344 173 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 RAB38P57729 211 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 OCRLQ01968 901 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 Q6ZSR9 355 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 PAGE2Q7Z2X7 111 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 COMMD6Q7Z4G1 85 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 LAPTM4BQ86VI4 370 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 DDIASQ8IXT1 998 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 ARFGAP2Q8N6H7 521 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 C1orf52Q8N6N3 182 aaKnown RBP11.13□□□□□ -0.63
CPNE1-221ENST00000462352 LRRC8CQ8TDW0 803 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 CHTF18Q8WVB6 975 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 CKAP2Q8WWK9 683 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 TBC1D20Q96BZ9 403 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 APIPQ96GX9 242 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 OR1F2PQ96R84 312 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 MAPKAP1Q9BPZ7 522 aa11.13□□□□□ -0.63
CPNE1-221ENST00000462352 DDX31Q9H8H2 851 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms