RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SLC44A1Q8WWI5 657 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 UBE2E3Q969T4 207 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 SERINC2Q96SA4 455 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 PAFAH2Q99487 392 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 NPAS2Q99743 824 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 SLX1AQ9BQ83 275 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 NPLQ9BXD5 320 aaPredicted RBP9.54□□□□□ -0.88
SF3A3-204ENST00000462258 FUT8Q9BYC5 575 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 TSPYL1Q9H0U9 437 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 NECTIN3Q9NQS3 549 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 ZNF490Q9ULM2 529 aaPredicted RBP9.54□□□□□ -0.88
SF3A3-204ENST00000462258 MRPS33Q9Y291 106 aaKnown RBP9.54□□□□□ -0.88
SF3A3-204ENST00000462258 MAST4O15021 2626 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 ICE1Q9Y2F5 2266 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 GABRR3A8MPY1 467 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 PRAMEF2O60811 474 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 KLHL2O95198 593 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 INHBAP08476 426 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 PCNAP12004 261 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 GP1BBP13224 206 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 MTHFD2P13995 350 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 EPB42P16452 691 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 TYK2P29597 1187 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 SERPINB1P30740 379 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 CASP2P42575 452 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 TDGF1P3P51864 188 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 HNRNPFP52597 415 aaKnown RBP9.53□□□□□ -0.88
SF3A3-204ENST00000462258 MTTPP55157 894 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 TUBA3CQ13748 450 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 RUNX2Q13950 521 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 NAA30Q147X3 362 aaPredicted RBP9.53□□□□□ -0.88
SF3A3-204ENST00000462258 ACAP2Q15057 778 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 TECRLQ5HYJ1 363 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 GRHL2Q6ISB3 625 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 MED27Q6P2C8 311 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 KLC3Q6P597 504 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 ABHD17CQ6PCB6 329 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 TUBA3EQ6PEY2 450 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 LGI4Q8N135 537 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 TEX9Q8N6V9 391 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 TMEM52Q8NDY8 209 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 ELP5Q8TE02 316 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 ZNF473Q8WTR7 871 aaKnown RBP9.53□□□□□ -0.88
SF3A3-204ENST00000462258 NR4A3Q92570 626 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 ISL2Q96A47 359 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 QRFPRQ96P65 431 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 KCNC2Q96PR1 638 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 PSMG3-AS1Q96PY0 264 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 TAAR6Q96RI8 345 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 CSF3RQ99062 836 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 MS4A8Q9BY19 250 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 VPS11Q9H270 941 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 PRTFDC1Q9NRG1 225 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 ANKRD10Q9NXR5 420 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 STMN3Q9NZ72 180 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 CPSF2Q9P2I0 782 aaKnown RBP9.53□□□□□ -0.88
SF3A3-204ENST00000462258 ERRFI1Q9UJM3 462 aaPredicted RBP9.53□□□□□ -0.88
SF3A3-204ENST00000462258 SLC5A6Q9Y289 635 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 ANGPTL3Q9Y5C1 460 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 IKBKGQ9Y6K9 419 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 ZGRF1Q86YA3 2104 aa9.53□□□□□ -0.88
SF3A3-204ENST00000462258 POLEQ07864 2286 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 CYSRT1A8MQ03 144 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 A8MUA0 341 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 TGFBR3LH3BV60 316 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 MAN1A2O60476 641 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 MYO1DO94832 1006 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 RASAL1O95294 804 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 DDAH2O95865 285 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 MYBL2P10244 700 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 SSR2P43308 183 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 MAGEA12P43365 314 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 SERPINB9P50453 376 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 ST13P50502 369 aaKnown RBP9.52□□□□□ -0.89
SF3A3-204ENST00000462258 ALDH18A1P54886 795 aaKnown RBP9.52□□□□□ -0.89
SF3A3-204ENST00000462258 LIM2P55344 173 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 HSD17B7P56937 341 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 PMP22Q01453 160 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 SLC13A2Q13183 592 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 DDX39BQ13838 428 aaKnown RBP9.52□□□□□ -0.89
SF3A3-204ENST00000462258 RCN2Q14257 317 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 TERF2Q15554 542 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 OR1C1Q15619 314 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 PFKFB4Q16877 469 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 ZNF766Q5HY98 468 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 ZNF793Q6ZN11 406 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 CLNKQ7Z7G1 428 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 MYLK4Q86YV6 388 aaPredicted RBP9.52□□□□□ -0.89
SF3A3-204ENST00000462258 ZNF595Q8IYB9 648 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 LAS2Q8IYD9 372 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 PLD6Q8N2A8 252 aaKnown RBP9.52□□□□□ -0.89
SF3A3-204ENST00000462258 CEP112Q8N8E3 955 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 MDS2Q8NDY4 140 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 SRFBP1Q8NEF9 429 aaKnown RBP9.52□□□□□ -0.89
SF3A3-204ENST00000462258 B3GNT7Q8NFL0 401 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 KIF18AQ8NI77 898 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 C5orf34Q96MH7 638 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 SIGLEC12Q96PQ1 595 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 F2RL3Q96RI0 385 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 UTP23Q9BRU9 249 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms