RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 A8MUA0 341 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 NEURL1O76050 574 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 TFEBP19484 476 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 TPP2P29144 1249 aaPredicted RBP17.72■□□□□ 0.43
VARS-220ENST00000461874 CASP2P42575 452 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 HSD17B7P56937 341 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 RAB38P57729 211 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 MLF1P58340 268 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 IRF8Q02556 426 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 CKAP4Q07065 602 aaKnown RBP17.72■□□□□ 0.43
VARS-220ENST00000461874 CHIT1Q13231 466 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 LAPTM5Q13571 262 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 ZRSR2Q15696 482 aaKnown RBP17.72■□□□□ 0.43
VARS-220ENST00000461874 PAGE2BQ5JRK9 111 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 ZNF468Q5VIY5 522 aaPredicted RBP17.72■□□□□ 0.43
VARS-220ENST00000461874 TRIM40Q6P9F5 258 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 ABHD17CQ6PCB6 329 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 TBC1D1Q86TI0 1168 aaPredicted RBP17.72■□□□□ 0.43
VARS-220ENST00000461874 ADAMTS18Q8TE60 1221 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 SERINC2Q96SA4 455 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 ATOH8Q96SQ7 321 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 PRTFDC1Q9NRG1 225 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 ZDHHC18Q9NUE0 388 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 NUDT4Q9NZJ9 180 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 LRFN1Q9P244 771 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 CLDN16Q9Y5I7 305 aa17.72■□□□□ 0.43
VARS-220ENST00000461874 ASPDHA6ND91 283 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 CLDN4O14493 209 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 ZG16O60844 167 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 KERAO60938 352 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 WISP2O76076 250 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 SP1P08047 785 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 LTA4HP09960 611 aaKnown RBP17.71■□□□□ 0.43
VARS-220ENST00000461874 EEF1DP29692 281 aaKnown RBP17.71■□□□□ 0.43
VARS-220ENST00000461874 HNRNPFP52597 415 aaKnown RBP17.71■□□□□ 0.43
VARS-220ENST00000461874 E2F2Q14209 437 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 TERF2Q15554 542 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 HIST2H2ACQ16777 129 aaPredicted RBP17.71■□□□□ 0.43
VARS-220ENST00000461874 ZNF787Q6DD87 383 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 HIST2H2AA3Q6FI13 130 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 SLC25A25Q6KCM7 469 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 ZNF595Q8IYB9 648 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 ARMC10Q8N2F6 343 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 TMEM178AQ8NBL3 297 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 APCDD1LQ8NCL9 501 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 TMEM52Q8NDY8 209 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 B3GNT7Q8NFL0 401 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 F2RL3Q96RI0 385 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 LRRC1Q9BTT6 524 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 DEFB126Q9BYW3 111 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 TRIM45Q9H8W5 580 aaPredicted RBP17.71■□□□□ 0.43
VARS-220ENST00000461874 PPIEQ9UNP9 301 aaKnown RBP17.71■□□□□ 0.43
VARS-220ENST00000461874 ACOT9Q9Y305 439 aa17.71■□□□□ 0.43
VARS-220ENST00000461874 SUPT3HB4E1H0 165 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 TGFBR3LH3BV60 316 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 UBXN8O00124 270 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 CYR61O00622 381 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 SUPT3HO75486 399 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 MYO1DO94832 1006 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 CERS1P27544 350 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 TRHRP34981 398 aaPredicted RBP17.7■□□□□ 0.42
VARS-220ENST00000461874 DCTP40126 519 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 CYB561P49447 251 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 MTTPP55157 894 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 LIM2P55344 173 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 PCDH1Q08174 1060 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 TGM3Q08188 693 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.7■□□□□ 0.42
VARS-220ENST00000461874 C8orf74Q6P047 294 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 MYO7BQ6PIF6 2116 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 GALNTL5Q7Z4T8 443 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 FAM47BQ8NA70 645 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 UBTD2Q8WUN7 234 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 NXNL1Q96CM4 212 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 PRDM7Q9NQW5 492 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 PNO1Q9NRX1 252 aaKnown RBP17.7■□□□□ 0.42
VARS-220ENST00000461874 DAPP1Q9UN19 280 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 MRPS33Q9Y291 106 aaKnown RBP17.7■□□□□ 0.42
VARS-220ENST00000461874 ITPR2Q14571 2701 aa17.7■□□□□ 0.42
VARS-220ENST00000461874 TRGV8A0A0C4DH27 118 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 HMX2A2RU54 273 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 SLC25A12O75746 678 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 PPP2R1BP30154 601 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 MSH2P43246 934 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 HLCSP50747 726 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 CLCN2P51788 898 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 GPR143P51810 404 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 RBPJQ06330 500 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 SLC13A2Q13183 592 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 RCN2Q14257 317 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 MROH9Q5TGP6 573 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 CCDC91Q7Z6B0 441 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 UBE3DQ7Z6J8 389 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 ZNF227Q86WZ6 799 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 CENPLQ8N0S6 344 aaPredicted RBP17.69■□□□□ 0.42
VARS-220ENST00000461874 SRFBP1Q8NEF9 429 aaKnown RBP17.69■□□□□ 0.42
VARS-220ENST00000461874 ZNF473Q8WTR7 871 aaKnown RBP17.69■□□□□ 0.42
VARS-220ENST00000461874 THAP3Q8WTV1 239 aaPredicted RBP17.69■□□□□ 0.42
VARS-220ENST00000461874 KCTD4Q8WVF5 259 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 UBE2E3Q969T4 207 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms