RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 B3GNT7Q8NFL0 401 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 OR2L5Q8NG80 312 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 STAG3L4Q8TBR4 150 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 FBXO25Q8TCJ0 367 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 ADAMTS18Q8TE60 1221 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 PTCD3Q96EY7 689 aaKnown RBP8.57□□□□□ -1.04
BRCA1-207ENST00000461798 FAR2Q96K12 515 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 EFCAB11Q9BUY7 163 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 CD244Q9BZW8 370 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 RAB17Q9H0T7 212 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 WWOXQ9NZC7 414 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 SCN2AQ99250 2005 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 SCN3AQ9NY46 2000 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 ZGRF1Q86YA3 2104 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 NBPF19A0A087WUL8 3843 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 CPAMD8Q8IZJ3 1885 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 DIDO1Q9BTC0 2240 aaKnown RBP8.56□□□□□ -1.04
BRCA1-207ENST00000461798 A0A088AWK7 358 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 ANKDD1BA6NHY2 528 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 NCF1BA6NI72 391 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-207ENST00000461798 NCF1CA8MVU1 366 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-207ENST00000461798 CYR61O00622 381 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 CLDN4O14493 209 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 CLGNO14967 610 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 ERI3O43414 337 aaKnown RBP8.56□□□□□ -1.04
BRCA1-207ENST00000461798 B3GALT2O43825 422 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 ZG16O60844 167 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 WISP2O76076 250 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 MLYCDO95822 493 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 SLC35E2BP0CK96 405 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 NCF1P14598 390 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-207ENST00000461798 CD22P20273 847 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 ZNF10P21506 573 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-207ENST00000461798 TPP2P29144 1249 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-207ENST00000461798 EEF1DP29692 281 aaKnown RBP8.56□□□□□ -1.04
BRCA1-207ENST00000461798 CA7P43166 264 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 HSPA7P48741 367 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 HLCSP50747 726 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 RAB38P57729 211 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 RBPJQ06330 500 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 C2orf54Q08AI8 447 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 ART3Q13508 389 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 RCN2Q14257 317 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 PDK4Q16654 411 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 KBTBD12Q3ZCT8 623 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 XKR6Q5GH73 641 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 PAGE2BQ5JRK9 111 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 ZNF468Q5VIY5 522 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-207ENST00000461798 MTFR2Q6P444 385 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 LIAT1Q6ZQX7 453 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 LRRC70Q7Z2Q7 622 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 CCDC91Q7Z6B0 441 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 ZNF227Q86WZ6 799 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 SIAH3Q8IW03 269 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 CTAGE3PQ8IX95 158 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 ZNF595Q8IYB9 648 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 CYP4X1Q8N118 509 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 KIF2BQ8N4N8 673 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 PPM1NQ8N819 430 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 APCDD1LQ8NCL9 501 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 SRFBP1Q8NEF9 429 aaKnown RBP8.56□□□□□ -1.04
BRCA1-207ENST00000461798 ESAMQ96AP7 390 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 FRMD6Q96NE9 622 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 SERINC2Q96SA4 455 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 ATOH8Q96SQ7 321 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 DEFB126Q9BYW3 111 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 UNKQ9C0B0 810 aaKnown RBP8.56□□□□□ -1.04
BRCA1-207ENST00000461798 ROGDIQ9GZN7 287 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 REXO4Q9GZR2 422 aaKnown RBP8.56□□□□□ -1.04
BRCA1-207ENST00000461798 NMRAL1Q9HBL8 299 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 PRDM7Q9NQW5 492 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 PRTFDC1Q9NRG1 225 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 CD274Q9NZQ7 290 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 KCMF1Q9P0J7 381 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 LRFN1Q9P244 771 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 ENTPD4Q9Y227 616 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 ZNF835Q9Y2P0 537 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.56□□□□□ -1.04
BRCA1-207ENST00000461798 TEX15Q9BXT5 2789 aa8.56□□□□□ -1.04
BRCA1-207ENST00000461798 NME2P1O60361 137 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 CTNSO60931 367 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 FAM155BO75949 473 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 SCELO95171 688 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 NME2P22392 152 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 STX2P32856 288 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 CYB561P49447 251 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 CLCN2P51788 898 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 HNRNPFP52597 415 aaKnown RBP8.55□□□□□ -1.04
BRCA1-207ENST00000461798 MTTPP55157 894 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 LIM2P55344 173 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 PMP22Q01453 160 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 OC90Q02509 493 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-207ENST00000461798 IRF8Q02556 426 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 TGM3Q08188 693 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 DLG1Q12959 904 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 EFTUD2Q15029 972 aaKnown RBP eCLIP8.55□□□□□ -1.04
BRCA1-207ENST00000461798 HIST2H2ACQ16777 129 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-207ENST00000461798 TMEM35AQ53FP2 167 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 C1QL3Q5VWW1 255 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 HIST2H2AA3Q6FI13 130 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms