RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CPOXP36551 454 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 NXPE4Q6UWF7 544 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 HSDL2Q6YN16 418 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 VTCN1Q7Z7D3 282 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 CHST14Q8NCH0 376 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 ATP6V1C2Q8NEY4 427 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 BBS10Q8TAM1 723 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 RAD9AQ99638 391 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 BTBD1Q9H0C5 482 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 NPIPB15A6NHN6 443 aaPredicted RBP14.19□□□□□ -0.14
PTPRU-205ENST00000460170 ANXA2P2A6NMY6 339 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 PDCD5O14737 125 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 SMAD6O43541 496 aaKnown RBP14.19□□□□□ -0.14
PTPRU-205ENST00000460170 TGM5O43548 720 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 ADH1BP00325 375 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 ANXA2P07355 339 aaKnown RBP14.19□□□□□ -0.14
PTPRU-205ENST00000460170 HNRNPA1P09651 372 aaKnown RBP eCLIP14.19□□□□□ -0.14
PTPRU-205ENST00000460170 HOXB2P14652 356 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 BMP8BP34820 402 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 NRIP1P48552 1158 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 PITPNAQ00169 270 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 METTL2BQ6P1Q9 378 aaKnown RBP14.19□□□□□ -0.14
PTPRU-205ENST00000460170 UGT2A3Q6UWM9 527 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.19□□□□□ -0.144e-8■■■■■ 34.6
PTPRU-205ENST00000460170 BMP8AQ7Z5Y6 402 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 CCDC116Q8IYX3 515 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 OR52E4Q8NGH9 312 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 SGIP1Q9BQI5 828 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 IFNA6P05013 189 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 OR12D1P0DN82 309 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 MANEALQ5VSG8 457 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 SLC36A4Q6YBV0 504 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 ZSWIM9Q86XI8 627 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 NRSN1Q8IZ57 195 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 KCNN1Q92952 543 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 MOAP1Q96BY2 351 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 LGALS12Q96DT0 336 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 MCHR1Q99705 422 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 TMED9Q9BVK6 235 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 TAPBPLQ9BX59 468 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 MED31Q9Y3C7 131 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 TOGARAM1Q9Y4F4 1720 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 TCRBV3S1A0A5B6 114 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 FAAHO00519 579 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 COQ9O75208 318 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 KRT33AO76009 404 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 CD2P06729 351 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 ATXN1LP0C7T5 689 aaKnown RBP14.19□□□□□ -0.14
PTPRU-205ENST00000460170 AHCYP23526 432 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 GSTM2P28161 218 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 STT3AP46977 705 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 TMEM236Q5W0B7 351 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 EFHD2Q96C19 240 aaPredicted RBP14.19□□□□□ -0.14
PTPRU-205ENST00000460170 ZNF597Q96LX8 424 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 F2RL3Q96RI0 385 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 TRIM36Q9NQ86 728 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 TBCCD1Q9NVR7 557 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 SLC16A8O95907 504 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 DNASE1L1P49184 302 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 DNASE1L3Q13609 305 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 EIF4HQ15056 248 aaKnown RBP14.18□□□□□ -0.14
PTPRU-205ENST00000460170 SLC14A2Q15849 920 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 ZNF296Q8WUU4 475 aaPredicted RBP14.18□□□□□ -0.14
PTPRU-205ENST00000460170 OSTF1Q92882 214 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 UBXN10Q96LJ8 280 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 TMEM165Q9HC07 324 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 NLGN3Q9NZ94 848 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 GPRC5BQ9NZH0 403 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 ST14Q9Y5Y6 855 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 TNFP01375 233 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 RGRP47804 291 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 STARP49675 285 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 CDKL1Q00532 357 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 ZNF33BQ06732 778 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 CBLBQ13191 982 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 DHCR24Q15392 516 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 ZNF367Q7RTV3 350 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 GALNT10Q86SR1 603 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 GHDCQ8N2G8 530 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 NETO1Q8TDF5 533 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 FEVQ99581 238 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 NDC1Q9BTX1 674 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 PAK1IP1Q9NWT1 392 aaPredicted RBP14.18□□□□□ -0.14
PTPRU-205ENST00000460170 LYARQ9NX58 379 aaKnown RBP14.18□□□□□ -0.14
PTPRU-205ENST00000460170 VAPAQ9P0L0 249 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 GPN3Q9UHW5 284 aaPredicted RBP14.18□□□□□ -0.14
PTPRU-205ENST00000460170 ADAMTS7Q9UKP4 1686 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 CPNE3O75131 537 aaKnown RBP14.18□□□□□ -0.14
PTPRU-205ENST00000460170 ENTPD6O75354 484 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 ETFAP13804 333 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 TXNL4AP83876 142 aaKnown RBP14.18□□□□□ -0.14
PTPRU-205ENST00000460170 ZCCHC12Q6PEW1 402 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 ATCAYQ86WG3 371 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 RNASE11Q8TAA1 199 aaKnown RBP14.18□□□□□ -0.14
PTPRU-205ENST00000460170 CITED4Q96RK1 184 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 SLC30A3Q99726 388 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 BARD1Q99728 777 aaKnown RBP14.18□□□□□ -0.14
PTPRU-205ENST00000460170 MARK1Q9P0L2 795 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 RIMS3Q9UJD0 308 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 AXIN1O15169 862 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms