RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 BTG2P78543 158 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 PHEXP78562 749 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 TMEM35AQ53FP2 167 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 KHDRBS2Q5VWX1 349 aaKnown RBP19.5■□□□□ 0.71
VARS-218ENST00000459667 CHSY3Q70JA7 882 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 RNF175Q8N4F7 328 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 OR52B6Q8NGF0 335 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 ADAMTS18Q8TE60 1221 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 EPS8L3Q8TE67 593 aaKnown RBP19.5■□□□□ 0.71
VARS-218ENST00000459667 PNPLA2Q96AD5 504 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 CDK15Q96Q40 435 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 MTERF1Q99551 399 aaKnown RBP19.5■□□□□ 0.71
VARS-218ENST00000459667 WDR77Q9BQA1 342 aaPredicted RBP19.5■□□□□ 0.71
VARS-218ENST00000459667 TBCDQ9BTW9 1192 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 EPS8L2Q9H6S3 715 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 ZBTB26Q9HCK0 441 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 SEMA4BQ9NPR2 832 aaPredicted RBP19.5■□□□□ 0.71
VARS-218ENST00000459667 DMRT3Q9NQL9 472 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 PRDM7Q9NQW5 492 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 LUZP4Q9P127 313 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 RAB21Q9UL25 225 aa19.5■□□□□ 0.71
VARS-218ENST00000459667 A0A1W2PPM1 405 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 SORBS2O94875 1100 aaKnown RBP19.49■□□□□ 0.71
VARS-218ENST00000459667 MAOAP21397 527 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 OR4D2P58180 307 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 ACTN3Q08043 901 aaPredicted RBP19.49■□□□□ 0.71
VARS-218ENST00000459667 TRAF3Q13114 568 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 BTBD16Q32M84 506 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 CRB2Q5IJ48 1285 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 PAPD4Q6PIY7 484 aaKnown RBP19.49■□□□□ 0.71
VARS-218ENST00000459667 IGFL2Q6UWQ7 119 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 ISLR2Q6UXK2 745 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 UBE3DQ7Z6J8 389 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 RIBC1Q8N443 379 aaPredicted RBP19.49■□□□□ 0.71
VARS-218ENST00000459667 SIRT6Q8N6T7 355 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 AMER2Q8N7J2 671 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 ZNF483Q8TF39 744 aaPredicted RBP19.49■□□□□ 0.71
VARS-218ENST00000459667 LPAR4Q99677 370 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 NTMT1Q9BV86 223 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 OR51B5Q9H339 312 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 PRDM9Q9NQV7 894 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 PTGFRNQ9P2B2 879 aa19.49■□□□□ 0.71
VARS-218ENST00000459667 TTLL8A6PVC2 850 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 FOXO6A8MYZ6 492 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 SAP18O00422 153 aaKnown RBP19.48■□□□□ 0.71
VARS-218ENST00000459667 RTCAO00442 366 aaKnown RBP19.48■□□□□ 0.71
VARS-218ENST00000459667 ITGAMP11215 1152 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 SOX11P35716 441 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 RAP1GDS1P52306 607 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 MLLT10P55197 1068 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 LIM2P55344 173 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 RPS13P62277 151 aaKnown RBP19.48■□□□□ 0.71
VARS-218ENST00000459667 MFAP5Q13361 173 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 ZRSR2Q15696 482 aaKnown RBP19.48■□□□□ 0.71
VARS-218ENST00000459667 AP5B1Q2VPB7 878 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 DEPDC1Q5TB30 811 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 PLAG1Q6DJT9 500 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 ZNF793Q6ZN11 406 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 LINC00696Q6ZRV3 163 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 RPS27LQ71UM5 84 aaKnown RBP19.48■□□□□ 0.71
VARS-218ENST00000459667 MREGQ8N565 214 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 FAM47BQ8NA70 645 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 Q8NA96 180 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 ARMC2Q8NEN0 867 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 WDR20Q8TBZ3 569 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 PSMF1Q92530 271 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 CENPKQ9BS16 269 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 C1QTNF3Q9BXJ4 246 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 SLAMF7Q9NQ25 335 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 NECTIN3Q9NQS3 549 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 DCDC2Q9UHG0 476 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 DAPP1Q9UN19 280 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 MRPS33Q9Y291 106 aaKnown RBP19.48■□□□□ 0.71
VARS-218ENST00000459667 B3GNT3Q9Y2A9 372 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 MMACHCQ9Y4U1 282 aa19.48■□□□□ 0.71
VARS-218ENST00000459667 IGKV3D-11A0A0A0MRZ8 115 aa19.47■□□□□ 0.71
VARS-218ENST00000459667 TCRBV16S1A1N1A0A5B0 115 aa19.47■□□□□ 0.71
VARS-218ENST00000459667 TLDC2A0PJX2 215 aa19.47■□□□□ 0.71
VARS-218ENST00000459667 GLRA3O75311 464 aa19.47■□□□□ 0.71
VARS-218ENST00000459667 HIST1H1TP22492 207 aaPredicted RBP19.47■□□□□ 0.71
VARS-218ENST00000459667 ATP5F1P24539 256 aaPredicted RBP19.47■□□□□ 0.71
VARS-218ENST00000459667 ATP5A1P25705 553 aaKnown RBP19.47■□□□□ 0.71
VARS-218ENST00000459667 SSR2P43308 183 aa19.47■□□□□ 0.71
VARS-218ENST00000459667 RCN2Q14257 317 aa19.47■□□□□ 0.71
VARS-218ENST00000459667 EXT1Q16394 746 aa19.47■□□□□ 0.71
VARS-218ENST00000459667 CYP4X1Q8N118 509 aa19.47■□□□□ 0.71
VARS-218ENST00000459667 ACOT4Q8N9L9 421 aa19.47■□□□□ 0.71
VARS-218ENST00000459667 PPP4R1Q8TF05 950 aa19.47■□□□□ 0.71
VARS-218ENST00000459667 RGMAQ96B86 450 aa19.47■□□□□ 0.71
VARS-218ENST00000459667 CSF3RQ99062 836 aa19.47■□□□□ 0.71
VARS-218ENST00000459667 ROPN1BQ9BZX4 212 aaPredicted RBP19.47■□□□□ 0.71
VARS-218ENST00000459667 ILKAPQ9H0C8 392 aaPredicted RBP19.47■□□□□ 0.71
VARS-218ENST00000459667 ROPN1Q9HAT0 212 aaPredicted RBP19.47■□□□□ 0.71
VARS-218ENST00000459667 PRTFDC1Q9NRG1 225 aa19.47■□□□□ 0.71
VARS-218ENST00000459667 CLDN4O14493 209 aa19.46■□□□□ 0.71
VARS-218ENST00000459667 DLX3O60479 287 aa19.46■□□□□ 0.71
VARS-218ENST00000459667 SCELO95171 688 aa19.46■□□□□ 0.71
VARS-218ENST00000459667 OTCP00480 354 aa19.46■□□□□ 0.71
VARS-218ENST00000459667 NEK2P51955 445 aa19.46■□□□□ 0.71
VARS-218ENST00000459667 HNRNPFP52597 415 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms