RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ABHD17BQ5VST6 288 aa21.79■■□□□ 1.08
CBX3-204ENST00000456948 KHDRBS2Q5VWX1 349 aaKnown RBP21.79■■□□□ 1.08
CBX3-204ENST00000456948 TTC19Q6DKK2 380 aaPredicted RBP21.79■■□□□ 1.08
CBX3-204ENST00000456948 PAPD4Q6PIY7 484 aaKnown RBP21.79■■□□□ 1.08
CBX3-204ENST00000456948 IGFL2Q6UWQ7 119 aa21.79■■□□□ 1.08
CBX3-204ENST00000456948 LINC00696Q6ZRV3 163 aa21.79■■□□□ 1.08
CBX3-204ENST00000456948 ZNF595Q8IYB9 648 aa21.79■■□□□ 1.08
CBX3-204ENST00000456948 CYP4X1Q8N118 509 aa21.79■■□□□ 1.08
CBX3-204ENST00000456948 L3MBTL4Q8NA19 623 aa21.79■■□□□ 1.08
CBX3-204ENST00000456948 HUS1BQ8NHY5 278 aa21.79■■□□□ 1.08
CBX3-204ENST00000456948 DNAJB14Q8TBM8 379 aa21.79■■□□□ 1.08
CBX3-204ENST00000456948 M1APQ8TC57 530 aa21.79■■□□□ 1.08
CBX3-204ENST00000456948 BRIX1Q8TDN6 353 aaKnown RBP21.79■■□□□ 1.08
CBX3-204ENST00000456948 MESP1Q9BRJ9 268 aa21.79■■□□□ 1.08
CBX3-204ENST00000456948 ANKZF1Q9H8Y5 726 aa21.79■■□□□ 1.08
CBX3-204ENST00000456948 PSD3Q9NYI0 1048 aa21.79■■□□□ 1.08
CBX3-204ENST00000456948 SCN2AQ99250 2005 aa21.79■■□□□ 1.08
CBX3-204ENST00000456948 IGHV3-20A0A0C4DH32 117 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 OR2W5A6NFC9 320 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 DNAJB6O75190 326 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 OTCP00480 354 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 CCT5P48643 541 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 HSD17B7P56937 341 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 TAS2R50P59544 299 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 ARG2P78540 354 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 SLC13A2Q13183 592 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 RUNX2Q13950 521 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 TLR1Q15399 786 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 DEPDC1Q5TB30 811 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 TDRPQ86YL5 185 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 SLC22A9Q8IVM8 553 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 CPT1CQ8TCG5 803 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 QRFPRQ96P65 431 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 NTMT1Q9BV86 223 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 AICDAQ9GZX7 198 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 EPB41L4BQ9H329 900 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 KCNK13Q9HB14 408 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 LYRM4Q9HD34 91 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 PRDM7Q9NQW5 492 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 PRTFDC1Q9NRG1 225 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 ABI3Q9P2A4 366 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 DAPP1Q9UN19 280 aa21.78■■□□□ 1.08
CBX3-204ENST00000456948 LRRC14BA6NHZ5 514 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 PYGBP11216 843 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 SSR2P43308 183 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 MLLT10P55197 1068 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 LIM2P55344 173 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 RASA2Q15283 850 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 PLEKHN1Q494U1 663 aaPredicted RBP21.77■■□□□ 1.08
CBX3-204ENST00000456948 ADNP2Q6IQ32 1131 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 Q6ZS92 163 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 MILR1Q7Z6M3 343 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 SIRT6Q8N6T7 355 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 TSLPQ969D9 159 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 ZNF354BQ96LW1 612 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 MTERF1Q99551 399 aaKnown RBP21.77■■□□□ 1.08
CBX3-204ENST00000456948 MMP25Q9NPA2 562 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 DMRT3Q9NQL9 472 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 MS4A12Q9NXJ0 267 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 STMN3Q9NZ72 180 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 MAP10Q9P2G4 905 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 PCTPQ9UKL6 214 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 RNF11Q9Y3C5 154 aa21.77■■□□□ 1.08
CBX3-204ENST00000456948 A8MUI8 341 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 FAM227AF5H4B4 570 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 GOLGA8RI6L899 631 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 FOXE1O00358 373 aaPredicted RBP21.76■■□□□ 1.07
CBX3-204ENST00000456948 CDH16O75309 829 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 VPS4BO75351 444 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 SORBS2O94875 1100 aaKnown RBP21.76■■□□□ 1.07
CBX3-204ENST00000456948 ITGAMP11215 1152 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 HIST1H1TP22492 207 aaPredicted RBP21.76■■□□□ 1.07
CBX3-204ENST00000456948 ATP5F1P24539 256 aaPredicted RBP21.76■■□□□ 1.07
CBX3-204ENST00000456948 ATP5A1P25705 553 aaKnown RBP21.76■■□□□ 1.07
CBX3-204ENST00000456948 CERS1P27544 350 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 EFNA3P52797 238 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 BTG2P78543 158 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 FOXK1P85037 733 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 IFT88Q13099 833 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 ZRSR2Q15696 482 aaKnown RBP21.76■■□□□ 1.07
CBX3-204ENST00000456948 OR4C11Q6IEV9 310 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 ACOT4Q8N9L9 421 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 SUN3Q8TAQ9 357 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 CCDC126Q96EE4 140 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 CNDP1Q96KN2 507 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 SLC29A3Q9BZD2 475 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 OR51B5Q9H339 312 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 SEMA4BQ9NPR2 832 aaPredicted RBP21.76■■□□□ 1.07
CBX3-204ENST00000456948 AHSPQ9NZD4 102 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 TMEM216Q9P0N5 145 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 VPS4AQ9UN37 437 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 STK38LQ9Y2H1 464 aa21.76■■□□□ 1.07
CBX3-204ENST00000456948 RP1L1Q8IWN7 2480 aaPredicted RBP21.75■■□□□ 1.07
CBX3-204ENST00000456948 TCRBV16S1A1N1A0A5B0 115 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 A8MT66 165 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 C4orf51C9J302 202 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 GLRA3O75311 464 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 TBX6O95947 436 aaPredicted RBP21.75■■□□□ 1.07
CBX3-204ENST00000456948 MAOAP21397 527 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 TLX1P31314 330 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms