RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 PLEKHN1Q494U1 663 aaPredicted RBP17■□□□□ 0.31
PDLIM2-215ENST00000456545 PAPD4Q6PIY7 484 aaKnown RBP17■□□□□ 0.31
PDLIM2-215ENST00000456545 QSOX2Q6ZRP7 698 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 ATCAYQ86WG3 371 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 HUS1BQ8NHY5 278 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 CPT1CQ8TCG5 803 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 RGMAQ96B86 450 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 IMMP1LQ96LU5 166 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 MTERF1Q99551 399 aaKnown RBP17■□□□□ 0.31
PDLIM2-215ENST00000456545 EPB41L4BQ9H329 900 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 OR51B5Q9H339 312 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 KCNK13Q9HB14 408 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 SEMA4BQ9NPR2 832 aaPredicted RBP17■□□□□ 0.31
PDLIM2-215ENST00000456545 PRTFDC1Q9NRG1 225 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 TMEM216Q9P0N5 145 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 RNF11Q9Y3C5 154 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 BOD1L1Q8NFC6 3051 aa17■□□□□ 0.31
PDLIM2-215ENST00000456545 DOCK10Q96BY6 2186 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 A8MUA0 341 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 SAP18O00422 153 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 SHBGP04278 402 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 CELA2AP08217 269 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 GSTA1P08263 222 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 ITGAMP11215 1152 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 MAOAP21397 527 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 PTX3P26022 381 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 CERS1P27544 350 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 SSR2P43308 183 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 ARG2P78540 354 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 ZRSR2Q15696 482 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 IGFBP7Q16270 282 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 DEPDC1Q5TB30 811 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 ABHD17BQ5VST6 288 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 KHDRBS2Q5VWX1 349 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 PLAG1Q6DJT9 500 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 MILR1Q7Z6M3 343 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 MTFMTQ96DP5 389 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 QRFPRQ96P65 431 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 CDK15Q96Q40 435 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 WDR77Q9BQA1 342 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 PRDM7Q9NQW5 492 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 STMN3Q9NZ72 180 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 MMACHCQ9Y4U1 282 aa16.99■□□□□ 0.31
PDLIM2-215ENST00000456545 TLDC2A0PJX2 215 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 A8MT66 165 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 H0YIV9 168 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 RTCAO00442 366 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 VPS4BO75351 444 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 TBX6O95947 436 aaPredicted RBP16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 CD97P48960 835 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 LIM2P55344 173 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 TAS2R50P59544 299 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 RPS13P62277 151 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 OR4C11Q6IEV9 310 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 IQCKQ8N0W5 287 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 RNF175Q8N4F7 328 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 ACOT4Q8N9L9 421 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 L3MBTL4Q8NA19 623 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 FAM47BQ8NA70 645 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 M1APQ8TC57 530 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 PCTPQ9UKL6 214 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 DAPP1Q9UN19 280 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 VPS4AQ9UN37 437 aa16.98■□□□□ 0.31
PDLIM2-215ENST00000456545 SMG1Q96Q15 3661 aaKnown RBP16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 TLN1Q9Y490 2541 aaKnown RBP16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 A0A1W2PPM1 405 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 OR7A17O14581 309 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 SUPT7LO94864 414 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 OTCP00480 354 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 ATP5A1P25705 553 aaKnown RBP16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 HSD17B3P37058 310 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 CCT5P48643 541 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 NEK2P51955 445 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 HSD17B7P56937 341 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 VSNL1P62760 191 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 ZNF33BQ06732 778 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 IFFO1Q0D2I5 559 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 IFT88Q13099 833 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 INPP5JQ15735 1006 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 B3GNTL1Q67FW5 361 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 IGFL2Q6UWQ7 119 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 SLC22A9Q8IVM8 553 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 ZNF595Q8IYB9 648 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 OR52B6Q8NGF0 335 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 PSMF1Q92530 271 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 ZNF354BQ96LW1 612 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 NSUN5Q96P11 429 aaKnown RBP16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 NTMT1Q9BV86 223 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 LYRM4Q9HD34 91 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 DMRT3Q9NQL9 472 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 NECTIN3Q9NQS3 549 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 PNO1Q9NRX1 252 aaKnown RBP16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 PLA2G3Q9NZ20 509 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 ABI3Q9P2A4 366 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 FBXW2Q9UKT8 454 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 PLAAQ9Y263 795 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 TSC22D4Q9Y3Q8 395 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 V9GYY5 206 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms