RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 GABRB3P28472 473 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PBLDP30039 288 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 HTR3AP46098 478 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 DNASE1L1P49184 302 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 GZMKP49863 264 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PRKXP51817 358 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 C19orf57Q0VDD7 668 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SP140Q13342 867 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 GINS1Q14691 196 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 GRIN2CQ14957 1233 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 TMEM132BQ14DG7 1078 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 TRAM2Q15035 370 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 ALG11Q2TAA5 492 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 MFSD14CQ5VZR4 134 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 CFAP77Q6ZQR2 320 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 FAM122BQ7Z309 247 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 GPR149Q86SP6 731 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 C17orf64Q86WR6 236 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SYT14Q8NB59 555 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SIDT2Q8NBJ9 832 aaKnown RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 NPLOC4Q8TAT6 608 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SLC35F5Q8WV83 523 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PPP1R14AQ96A00 147 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SPACA7Q96KW9 195 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 OSMRQ99650 979 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 CIPCQ9C0C6 399 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 FZD8Q9H461 694 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 ELAC1Q9H777 363 aaKnown RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 TEX10Q9NXF1 929 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 GPR83Q9NYM4 423 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 ABCD2Q9UBJ2 740 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 KIF25Q9UIL4 384 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 IKZF2Q9UKS7 526 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 POLR1DQ9Y2S0 133 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 HEMK1Q9Y5R4 338 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 NRCAMQ92823 1304 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 STK25O00506 426 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 GRIN3BO60391 1043 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 C22orf31O95567 290 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 URODP06132 367 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 CHRM5P08912 532 aaPredicted RBP4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ZDHHC11BP0C7U3 371 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 OSMP13725 252 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ARSBP15848 533 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 DDCP20711 480 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ACVR2AP27037 513 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 RBMS1P29558 406 aaKnown RBP4.82□□□□□ -1.64
PCDH9-203ENST00000456367 SHMT2P34897 504 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 SCNN1GP51170 649 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 INHBEP58166 350 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ACTBP60709 375 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ACTG1P63261 375 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 CLDN10P78369 228 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 SLC10A7Q0GE19 358 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 GRB14Q14449 540 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 TAZQ16635 292 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 DALRD3Q5D0E6 543 aaKnown RBP4.82□□□□□ -1.64
PCDH9-203ENST00000456367 CCNJQ5T5M9 372 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 C9orf64Q5T6V5 341 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 AGMOQ6ZNB7 445 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 SERPINA11Q86U17 422 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 TPRA1Q86W33 373 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ADGRG2Q8IZP9 1017 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ARMC10Q8N2F6 343 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF248Q8NDW4 579 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ADAMTS14Q8WXS8 1223 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 DPF3Q92784 378 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 RIT1Q92963 219 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 RAD51AP1Q96B01 352 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 PEBP4Q96S96 227 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 FEVQ99581 238 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 THAP7Q9BT49 309 aaPredicted RBP4.82□□□□□ -1.64
PCDH9-203ENST00000456367 STRA6Q9BX79 667 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ARHGAP39Q9C0H5 1083 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ZFR2Q9UPR6 939 aaKnown RBP4.82□□□□□ -1.64
PCDH9-203ENST00000456367 PRELID3BQ9Y3B1 194 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 HRH3Q9Y5N1 445 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 A8MU76 341 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 VIPP01282 170 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 JUNDP17535 347 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ARF4P18085 180 aaPredicted RBP4.82□□□□□ -1.64
PCDH9-203ENST00000456367 NRLP54845 237 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 RAB4BP61018 213 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 HMGCS1Q01581 520 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 TAP2Q03519 686 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 GANABQ14697 944 aaKnown RBP4.82□□□□□ -1.64
PCDH9-203ENST00000456367 STK11Q15831 433 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 MICAQ29983 383 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 INAVAQ3KP66 663 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 RNF212Q495C1 297 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 GRHL2Q6ISB3 625 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ZCCHC12Q6PEW1 402 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ENPP6Q6UWR7 440 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 SSX9Q7RTT3 188 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 LDB1Q86U70 411 aaPredicted RBP4.82□□□□□ -1.64
PCDH9-203ENST00000456367 COMMD2Q86X83 199 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 SLC43A3Q8NBI5 491 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 ACBD4Q8NC06 268 aa4.82□□□□□ -1.64
PCDH9-203ENST00000456367 OR2L2Q8NH16 312 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms