RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 LUZP4Q9P127 313 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 TBK1Q9UHD2 729 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 HIVEP3Q5T1R4 2406 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 OR2W5A6NFC9 320 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 CYSRT1A8MQ03 144 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 CDH16O75309 829 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 CLDN9O95484 217 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 NUDT17P0C025 328 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 PYGBP11216 843 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 PCNAP12004 261 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 TAC1P20366 129 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 TSFMP43897 325 aaKnown RBP16.3■□□□□ 0.2
USP39-208ENST00000455732 ARFIP1P53367 373 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 TRAF3Q13114 568 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 NSDHLQ15738 373 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 GGTA1PQ4G0N0 100 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 C10orf62Q5T681 223 aaPredicted RBP16.3■□□□□ 0.2
USP39-208ENST00000455732 KHDRBS2Q5VWX1 349 aaKnown RBP16.3■□□□□ 0.2
USP39-208ENST00000455732 PLAG1Q6DJT9 500 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 SH2D5Q6ZV89 423 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 CHSY3Q70JA7 882 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 UBE3DQ7Z6J8 389 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 MYLK4Q86YV6 388 aaPredicted RBP16.3■□□□□ 0.2
USP39-208ENST00000455732 OR52B6Q8NGF0 335 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 HUS1BQ8NHY5 278 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 ZNF483Q8TF39 744 aaPredicted RBP16.3■□□□□ 0.2
USP39-208ENST00000455732 TSLPQ969D9 159 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 CAVIN3Q969G5 261 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 F2RL3Q96RI0 385 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 COPS7BQ9H9Q2 264 aaPredicted RBP16.3■□□□□ 0.2
USP39-208ENST00000455732 ZBTB26Q9HCK0 441 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 SLAMF7Q9NQ25 335 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 PRDM9Q9NQV7 894 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 PRDM7Q9NQW5 492 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 PSD3Q9NYI0 1048 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 PPT2Q9UMR5 302 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 B3GNT3Q9Y2A9 372 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 MMACHCQ9Y4U1 282 aa16.3■□□□□ 0.2
USP39-208ENST00000455732 IGKV3D-11A0A0A0MRZ8 115 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 A0A0G2JN53 185 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 GOLGA8RI6L899 631 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 PRMT3O60678 531 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 B4GALT2O60909 372 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 CERS1P27544 350 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 SOX11P35716 441 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 SLCO1A2P46721 670 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 CCNG1P51959 295 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 RAB38P57729 211 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 HERVK_113P63132 956 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 PHEXP78562 749 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 RUNX2Q13950 521 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 RCN2Q14257 317 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 INPP5JQ15735 1006 aaPredicted RBP16.29■□□□□ 0.2
USP39-208ENST00000455732 PRR30Q53SZ7 412 aaPredicted RBP16.29■□□□□ 0.2
USP39-208ENST00000455732 CRB2Q5IJ48 1285 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 DEPDC1Q5TB30 811 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 Q6ZS92 163 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 ZADH2Q8N4Q0 377 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 WDR20Q8TBZ3 569 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 EPS8L3Q8TE67 593 aaKnown RBP16.29■□□□□ 0.2
USP39-208ENST00000455732 PSMF1Q92530 271 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 MAGEB10Q96LZ2 347 aaPredicted RBP16.29■□□□□ 0.2
USP39-208ENST00000455732 NSUN5Q96P11 429 aaKnown RBP16.29■□□□□ 0.2
USP39-208ENST00000455732 ERVK-6Q9BXR3 956 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 LYRM4Q9HD34 91 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 DCDC2Q9UHG0 476 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 DAPP1Q9UN19 280 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 RNF11Q9Y3C5 154 aa16.29■□□□□ 0.2
USP39-208ENST00000455732 IGHV3-20A0A0C4DH32 117 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 A0A1W2PPM1 405 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 TCRBV16S1A1N1A0A5B0 115 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 CLEC18AA5D8T8 446 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 SYNDIG1LA6NDD5 238 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 FOXE1O00358 373 aaPredicted RBP16.28■□□□□ 0.2
USP39-208ENST00000455732 GLRA3O75311 464 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 SEC24DO94855 1032 aaPredicted RBP16.28■□□□□ 0.2
USP39-208ENST00000455732 OTCP00480 354 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 TGFB1P01137 390 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 HIST1H1TP22492 207 aaPredicted RBP16.28■□□□□ 0.2
USP39-208ENST00000455732 ATP5F1P24539 256 aaPredicted RBP16.28■□□□□ 0.2
USP39-208ENST00000455732 ATP5A1P25705 553 aaKnown RBP16.28■□□□□ 0.2
USP39-208ENST00000455732 LIM2P55344 173 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 ZRSR2Q15696 482 aaKnown RBP16.28■□□□□ 0.2
USP39-208ENST00000455732 EXT1Q16394 746 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 CPSF6Q16630 551 aaKnown RBP eCLIP16.28■□□□□ 0.2
USP39-208ENST00000455732 SFT2D3Q587I9 215 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 CLEC18BQ6UXF7 455 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 ISLR2Q6UXK2 745 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 ZNF793Q6ZN11 406 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 ATCAYQ86WG3 371 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 SCUBE1Q8IWY4 988 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 RIBC1Q8N443 379 aaPredicted RBP16.28■□□□□ 0.2
USP39-208ENST00000455732 CLEC18CQ8NCF0 446 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 PPP4R1Q8TF05 950 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 ATP6V1E2Q96A05 226 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 PTCHD1Q96NR3 888 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 CENPKQ9BS16 269 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 MRPS33Q9Y291 106 aaKnown RBP16.28■□□□□ 0.2
USP39-208ENST00000455732 CSAG2Q9Y5P2 127 aa16.28■□□□□ 0.2
USP39-208ENST00000455732 SVILO95425 2214 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms