RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 GPR83Q9NYM4 423 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 C19orf25Q9UFG5 118 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-205ENST00000454542 GRID1Q9ULK0 1009 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 DAPP1Q9UN19 280 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 MMACHCQ9Y4U1 282 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 PLPP1O14494 284 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 B3GALT2O43825 422 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 TGFB1P01137 390 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 MYL2P10916 166 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 HIST1H1TP22492 207 aaPredicted RBP13.33□□□□□ -0.28
HDAC4-205ENST00000454542 ATP5A1P25705 553 aaKnown RBP13.33□□□□□ -0.28
HDAC4-205ENST00000454542 PGDP52209 483 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 LIM2P55344 173 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 DNAJB13P59910 316 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 NAA20P61599 178 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 RPS13P62277 151 aaKnown RBP13.33□□□□□ -0.28
HDAC4-205ENST00000454542 PHEXP78562 749 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 CUL3Q13618 768 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 TNFAIP8L3Q5GJ75 292 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 FRG2Q64ET8 278 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 ANKRD37Q7Z713 158 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 MYLK4Q86YV6 388 aaPredicted RBP13.33□□□□□ -0.28
HDAC4-205ENST00000454542 HPS6Q86YV9 775 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 IQCKQ8N0W5 287 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 ZCCHC7Q8N3Z6 543 aaKnown RBP13.33□□□□□ -0.28
HDAC4-205ENST00000454542 IMMP1LQ96LU5 166 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 FRG2BQ96QU4 278 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 MTERF1Q99551 399 aaKnown RBP13.33□□□□□ -0.28
HDAC4-205ENST00000454542 OR51B5Q9H339 312 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 ZNF552Q9H707 407 aaPredicted RBP13.33□□□□□ -0.28
HDAC4-205ENST00000454542 COPS7BQ9H9Q2 264 aaPredicted RBP13.33□□□□□ -0.28
HDAC4-205ENST00000454542 LYRM4Q9HD34 91 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 STK38LQ9Y2H1 464 aa13.33□□□□□ -0.28
HDAC4-205ENST00000454542 SPTA1P02549 2419 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 NSG1A0A0A6YYJ2 146 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 TCRBV16S1A1N1A0A5B0 115 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 TLDC2A0PJX2 215 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 CCDC151A5D8V7 595 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 OR2W5A6NFC9 320 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 EIF4E1BA6NMX2 242 aaKnown RBP13.32□□□□□ -0.28
HDAC4-205ENST00000454542 RTCAO00442 366 aaKnown RBP13.32□□□□□ -0.28
HDAC4-205ENST00000454542 CYR61O00622 381 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 KLHL41O60662 606 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 CDC123O75794 336 aaPredicted RBP13.32□□□□□ -0.28
HDAC4-205ENST00000454542 SUPT7LO94864 414 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 MLYCDO95822 493 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 TSPAN8P19075 237 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 SOX11P35716 441 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 HNRNPFP52597 415 aaKnown RBP13.32□□□□□ -0.28
HDAC4-205ENST00000454542 NFATC3Q12968 1075 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 LCP2Q13094 533 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 DDX39BQ13838 428 aaKnown RBP13.32□□□□□ -0.28
HDAC4-205ENST00000454542 PCLAFQ15004 111 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 ABRAXAS2Q15018 415 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 FAAH2Q6GMR7 532 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 MRM1Q6IN84 353 aaKnown RBP13.32□□□□□ -0.28
HDAC4-205ENST00000454542 IGFL2Q6UWQ7 119 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 RIPOR1Q6ZS17 1223 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 FRMD7Q6ZUT3 714 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 CHSY3Q70JA7 882 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 CPEB2Q7Z5Q1 589 aaKnown RBP13.32□□□□□ -0.28
HDAC4-205ENST00000454542 ACOT4Q8N9L9 421 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 TMEM52Q8NDY8 209 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 TRPC4APQ8TEL6 797 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 AGAP11Q8TF27 550 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 METTL21AQ8WXB1 218 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 ATP6V1E2Q96A05 226 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 CSF3RQ99062 836 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 TUBB6Q9BUF5 446 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 SLC29A3Q9BZD2 475 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 LHPPQ9H008 270 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 C12orf65Q9H3J6 166 aaKnown RBP13.32□□□□□ -0.28
HDAC4-205ENST00000454542 ZNF160Q9HCG1 818 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 PRDM9Q9NQV7 894 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 ZNF71Q9NQZ8 489 aaPredicted RBP13.32□□□□□ -0.28
HDAC4-205ENST00000454542 OXSMQ9NWU1 459 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 KCMF1Q9P0J7 381 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 SENP1Q9P0U3 644 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 C5AR2Q9P296 337 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 MID2Q9UJV3 735 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 PLLPQ9Y342 182 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 ZNF451Q9Y4E5 1061 aa13.32□□□□□ -0.28
HDAC4-205ENST00000454542 A0A0A6YYD5 115 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 SYNDIG1LA6NDD5 238 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 B8ZZF3 427 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 TGFBR3LH3BV60 316 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 PSMD12O00232 456 aaPredicted RBP13.31□□□□□ -0.28
HDAC4-205ENST00000454542 TYROBPO43914 113 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 SERPINA7P05543 415 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 PRR35P0CG20 571 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 PTX3P26022 381 aaPredicted RBP13.31□□□□□ -0.28
HDAC4-205ENST00000454542 BSGP35613 385 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 SSR2P43308 183 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 NEK2P51955 445 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 PKNOX1P55347 436 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 MFSD4BQ5TF39 518 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 FAM219BQ5XKK7 198 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 PLAG1Q6DJT9 500 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 IGFL3Q6UXB1 125 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 ASB18Q6ZVZ8 466 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms