RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 NDUFAF4Q9P032 175 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 ZNF282Q9UDV7 671 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 DYRK1BQ9Y463 629 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 LTBP4Q8N2S1 1624 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 CEP290O15078 2479 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 BCHEP06276 602 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 APEX1P27695 318 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 HSPB3Q12988 150 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 TATDN3Q17R31 274 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 COX20Q5RI15 118 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 LYPD8Q6UX82 237 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 TMIGD1Q6UXZ0 262 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 ZNF551Q7Z340 670 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 ZNF467Q7Z7K2 595 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 GATAD2BQ8WXI9 593 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 SCAMP4Q969E2 229 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 TP53INP1Q96A56 240 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 KATNBL1Q9H079 304 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 NMNAT1Q9HAN9 279 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 SEC14L3Q9UDX4 400 aa13.31□□□□□ -0.28
UBE2D3-210ENST00000453744 LOC102723532A0A0G2JNH3 316 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 MTMR11A4FU01 709 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 SMAD6O43541 496 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 PTPN2P17706 415 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 ACRV1P26436 265 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 ASMTP46597 345 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 PREPP48147 710 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 GATMP50440 423 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 HOXC5Q00444 222 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 DOC2AQ14183 400 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 HEPACAMQ14CZ8 416 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 TRMT11Q7Z4G4 463 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 TP53I13Q8NBR0 393 aaPredicted RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 GEMIN6Q8WXD5 167 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 C2orf78A6NCI8 922 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 EIF3FO00303 357 aaPredicted RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 PLD2O14939 933 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 SLC28A2O43868 658 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 CELF2O95319 508 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 LRIF1Q5T3J3 769 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 ADGRF1Q5T601 910 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 ADNP2Q6IQ32 1131 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 ZNF852Q6ZMS4 543 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 LHFPL3Q86UP9 236 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 THOC6Q86W42 341 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 PTOV1Q86YD1 416 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 AP3S1Q92572 193 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 EPYCQ99645 322 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 TM9SF2Q99805 663 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 HDHD5Q9BXW7 423 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 MED28Q9H204 178 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 CLEC4MQ9H2X3 399 aaPredicted RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 MCUBQ9NWR8 336 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 RPL36Q9Y3U8 105 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 A0A0G2JN53 185 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 E7EQ34 232 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 ORC5O43913 435 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 BUD31P41223 144 aaPredicted RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 BDKRB1P46663 353 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 MANFP55145 182 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 RPS7P62081 194 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 RPS26P11Q5JNZ5 115 aaPredicted RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 LRRC70Q7Z2Q7 622 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 CALHM3Q86XJ0 350 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 CIDECQ96AQ7 238 aaPredicted RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 OR2A14Q96R47 310 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 HTATIP2Q9BUP3 242 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 FNDC11Q9BVV2 318 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 ZNF226Q9NYT6 803 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 KNL1Q8NG31 2342 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 GON4LQ3T8J9 2241 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 CCR7P32248 378 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 FAM110CQ1W6H9 321 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 FRMPD2BQ6IN97 320 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 OR6C4Q8NGE1 309 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 P2RY13Q9BPV8 354 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 MAPKAP1Q9BPZ7 522 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 SERHL2Q9H4I8 314 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 SLA2Q9H6Q3 261 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 HCSTQ9UBK5 93 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 ING4Q9UNL4 249 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 YARS2Q9Y2Z4 477 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 PCDHB7Q9Y5E2 793 aa13.3□□□□□ -0.28
UBE2D3-210ENST00000453744 A0A1W2PRB8 838 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 INMT-MINDY4F8WBC2 141 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 MPZL2O60487 215 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 SCO1O75880 301 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 KLK1P06870 262 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 PRKACBP22694 351 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 CHMP24386 653 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 GPLD1P80108 840 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 ARF5P84085 180 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 CAMK2BQ13554 666 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 FXNQ16595 210 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 NCEH1Q6PIU2 408 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 MND1Q9BWT6 205 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 TTLL2Q9BWV7 592 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 TMEM39AQ9NV64 488 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 GPR52Q9Y2T5 361 aa13.29□□□□□ -0.28
UBE2D3-210ENST00000453744 IGLV3-10A0A075B6K4 115 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms