RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 VN1R5Q7Z5H4 357 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 EID3Q8N140 333 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 SLC22A18ASQ8N1D0 253 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 ZCCHC7Q8N3Z6 543 aaKnown RBP10.24□□□□□ -0.77
PKP4-206ENST00000452162 TFGQ92734 400 aaPredicted RBP10.24□□□□□ -0.77
PKP4-206ENST00000452162 PYURFQ96I23 114 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 C1QTNF7Q9BXJ2 289 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 CHST8Q9H2A9 424 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 MAGED1Q9Y5V3 778 aaPredicted RBP10.24□□□□□ -0.77
PKP4-206ENST00000452162 GNG14A0A1W2PPG7 69 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 AHCYL1O43865 530 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 CLIC3O95833 236 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 EFNA1P20827 205 aaPredicted RBP10.24□□□□□ -0.77
PKP4-206ENST00000452162 RPL10P27635 214 aaKnown RBP10.24□□□□□ -0.77
PKP4-206ENST00000452162 PEX19P40855 299 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 ALDH3B2P48448 385 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 IST1P53990 364 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 NXPH1P58417 271 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 TUBA4AP68366 448 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 VMACQ2NL98 169 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 ZNF385BQ569K4 471 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 ANXA8L1Q5VT79 327 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 ZCCHC8Q6NZY4 707 aaKnown RBP10.24□□□□□ -0.77
PKP4-206ENST00000452162 ERICH5Q6P6B1 374 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 PATL1Q86TB9 770 aaKnown RBP10.24□□□□□ -0.77
PKP4-206ENST00000452162 STK32CQ86UX6 486 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 IQCHQ86VS3 1027 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 FAM129CQ86XR2 697 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 METTL4Q8N3J2 472 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 SVOPLQ8N434 492 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 ZNF740Q8NDX6 193 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 OR5K2Q8NHB8 316 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 WDR48Q8TAF3 677 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 DGCR14Q96DF8 476 aaKnown RBP10.24□□□□□ -0.77
PKP4-206ENST00000452162 MENTQ9BUN1 341 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 OR51B5Q9H339 312 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 SOX17Q9H6I2 414 aaPredicted RBP10.24□□□□□ -0.77
PKP4-206ENST00000452162 GAREM1Q9H706 876 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 USE1Q9NZ43 259 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 SPTBN2O15020 2390 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 C4orf47A7E2U8 309 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 GPR89AB7ZAQ6 455 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 G3V2T6 193 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 KMOO15229 486 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 FOXD2O60548 495 aaPredicted RBP10.23□□□□□ -0.77
PKP4-206ENST00000452162 TGFB1P01137 390 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 SEMG1P04279 462 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 GPR89BP0CG08 455 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 THRBP10828 461 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 GSTT1P30711 240 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 TRIM23P36406 574 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 PPP2R2BQ00005 443 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 GAB1Q13480 694 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 PDE7AQ13946 482 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 ARHGAP19Q14CB8 494 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 CYP2A13Q16696 494 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 THEMIS2Q5TEJ8 643 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 BORAQ6PGQ7 559 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 TTC33Q6PID6 262 aaPredicted RBP10.23□□□□□ -0.77
PKP4-206ENST00000452162 RBM44Q6ZP01 1051 aaKnown RBP10.23□□□□□ -0.77
PKP4-206ENST00000452162 ZDHHC13Q8IUH4 622 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 OFCC1Q8IZS5 231 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 ZNF786Q8N393 782 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 UBE2E3Q969T4 207 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 RDH12Q96NR8 316 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 NRTNQ99748 197 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 SPATA9Q9BWV2 254 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 OSBPL10Q9BXB5 764 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 BHLHE41Q9C0J9 482 aaPredicted RBP10.23□□□□□ -0.77
PKP4-206ENST00000452162 REEP4Q9H6H4 257 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 TPT1P8Q9HAU6 139 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 MYNNQ9NPC7 610 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 TMEM9BQ9NQ34 198 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 GPR27Q9NS67 375 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 SAMD4AQ9UPU9 718 aaKnown RBP10.23□□□□□ -0.77
PKP4-206ENST00000452162 OR1A2Q9Y585 309 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 RNASET2O00584 256 aaKnown RBP10.23□□□□□ -0.77
PKP4-206ENST00000452162 BMP10O95393 424 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 ALBP02768 609 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 CDH15P55291 814 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 DMPKQ09013 629 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 LRRC74AQ0VAA2 488 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 MYBPC3Q14896 1274 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 STPG1Q5TH74 334 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 FAM71E1Q6IPT2 247 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 ABRAXAS1Q6UWZ7 409 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 TMIGD1Q6UXZ0 262 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 TMEM179BQ7Z7N9 219 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 GOT1L1Q8NHS2 421 aaPredicted RBP10.23□□□□□ -0.77
PKP4-206ENST00000452162 ZFP90Q8TF47 636 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 C16orf78Q8WTQ4 265 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 DPH2Q9BQC3 489 aaPredicted RBP10.23□□□□□ -0.77
PKP4-206ENST00000452162 WDR26Q9H7D7 661 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 PRM3Q9NNZ6 103 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 TUBA8Q9NY65 449 aaPredicted RBP10.23□□□□□ -0.77
PKP4-206ENST00000452162 TDRKHQ9Y2W6 561 aaKnown RBP10.23□□□□□ -0.77
PKP4-206ENST00000452162 LRP4O75096 1905 aa10.23□□□□□ -0.77
PKP4-206ENST00000452162 SAP18O00422 153 aaKnown RBP10.22□□□□□ -0.77
PKP4-206ENST00000452162 RPN2P04844 631 aa10.22□□□□□ -0.77
PKP4-206ENST00000452162 FURINP09958 794 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms