RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 CENPLQ8N0S6 344 aaPredicted RBP11.67□□□□□ -0.54
CPSF4-208ENST00000452047 CYP4X1Q8N118 509 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 APCDD1LQ8NCL9 501 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 ARMC2Q8NEN0 867 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 STAG3L4Q8TBR4 150 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 UBTD2Q8WUN7 234 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 EXT2Q93063 718 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 FAR2Q96K12 515 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 LRRC1Q9BTT6 524 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 CD244Q9BZW8 370 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 CDCP1Q9H5V8 836 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 NMRAL1Q9HBL8 299 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 NUDT4Q9NZJ9 180 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 ADGRG4Q8IZF6 3080 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 A0A088AWK7 358 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 A0A1B0GUH1 482 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 UBXN8O00124 270 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 CYR61O00622 381 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 CDK2AP1O14519 115 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 B3GALT2O43825 422 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 CCNT2O60583 730 aaKnown RBP11.66□□□□□ -0.54
CPSF4-208ENST00000452047 UNC5CO95185 931 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 S100BP04271 92 aaPredicted RBP11.66□□□□□ -0.54
CPSF4-208ENST00000452047 LTA4HP09960 611 aaKnown RBP11.66□□□□□ -0.54
CPSF4-208ENST00000452047 MTHFD2P13995 350 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 CD46P15529 392 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 ZNF10P21506 573 aaPredicted RBP11.66□□□□□ -0.54
CPSF4-208ENST00000452047 CERS1P27544 350 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 TPP2P29144 1249 aaPredicted RBP11.66□□□□□ -0.54
CPSF4-208ENST00000452047 PPP2R1BP30154 601 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 HPDP32754 393 aaPredicted RBP11.66□□□□□ -0.54
CPSF4-208ENST00000452047 PLA2G16P53816 162 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 PER3P56645 1201 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 HSD17B7P56937 341 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 RAB38P57729 211 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 MLF1P58340 268 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 IRF8Q02556 426 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 CKAP4Q07065 602 aaKnown RBP11.66□□□□□ -0.54
CPSF4-208ENST00000452047 PCDH1Q08174 1060 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 CHIT1Q13231 466 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 UBAP2Q5T6F2 1119 aaKnown RBP11.66□□□□□ -0.54
CPSF4-208ENST00000452047 C1QL3Q5VWW1 255 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 FJX1Q86VR8 437 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 ZNF227Q86WZ6 799 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 FAM47BQ8NA70 645 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 B3GNT7Q8NFL0 401 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 ADAMTS18Q8TE60 1221 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 RELTQ969Z4 430 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 FRMD6Q96NE9 622 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 SERINC2Q96SA4 455 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 CSF3RQ99062 836 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 MS4A8Q9BY19 250 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 TRIM45Q9H8W5 580 aaPredicted RBP11.66□□□□□ -0.54
CPSF4-208ENST00000452047 PRDM7Q9NQW5 492 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 KLHL1Q9NR64 748 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 PRTFDC1Q9NRG1 225 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 LRFN1Q9P244 771 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 SEC14L3Q9UDX4 400 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 ZNF223Q9UK11 482 aaPredicted RBP11.66□□□□□ -0.54
CPSF4-208ENST00000452047 DAPP1Q9UN19 280 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 PPIEQ9UNP9 301 aaKnown RBP11.66□□□□□ -0.54
CPSF4-208ENST00000452047 MYO7BQ6PIF6 2116 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 CSMD1Q96PZ7 3565 aa11.66□□□□□ -0.54
CPSF4-208ENST00000452047 A8MUA0 341 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 SUPT3HB4E1H0 165 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 K7EPI3 171 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 ZG16O60844 167 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 SUPT3HO75486 399 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 MYO1DO94832 1006 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 SP1P08047 785 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 EEF1DP29692 281 aaKnown RBP11.65□□□□□ -0.54
CPSF4-208ENST00000452047 TRHRP34981 398 aaPredicted RBP11.65□□□□□ -0.54
CPSF4-208ENST00000452047 DCTP40126 519 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 GPR143P51810 404 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 MTTPP55157 894 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 LIM2P55344 173 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 IRF9Q00978 393 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 OC90Q02509 493 aaPredicted RBP11.65□□□□□ -0.54
CPSF4-208ENST00000452047 LAPTM5Q13571 262 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 BMPR2Q13873 1038 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 ZRSR2Q15696 482 aaKnown RBP11.65□□□□□ -0.54
CPSF4-208ENST00000452047 PAGE2BQ5JRK9 111 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 MROH9Q5TGP6 573 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 ZNF787Q6DD87 383 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 ZNF793Q6ZN11 406 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 GALNTL5Q7Z4T8 443 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 CCDC91Q7Z6B0 441 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 UBE3DQ7Z6J8 389 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 ZNF595Q8IYB9 648 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 LAS2Q8IYD9 372 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 HORMAD2Q8N7B1 307 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 TMEM178AQ8NBL3 297 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 RHEBL1Q8TAI7 183 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 ZNF473Q8WTR7 871 aaKnown RBP11.65□□□□□ -0.54
CPSF4-208ENST00000452047 KCTD4Q8WVF5 259 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 NXNL1Q96CM4 212 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 C16orf45Q96MC5 204 aaPredicted RBP11.65□□□□□ -0.54
CPSF4-208ENST00000452047 F2RL3Q96RI0 385 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 SNX15Q9NRS6 342 aa11.65□□□□□ -0.54
CPSF4-208ENST00000452047 KCMF1Q9P0J7 381 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms