RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 SYCE1LA8MT33 242 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 K7EPI3 171 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 PRAMEF2O60811 474 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 CLEC3AO75596 197 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 KLHL2O95198 593 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 RASAL1O95294 804 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 SIX3O95343 332 aaPredicted RBP9.07□□□□□ -0.96
USP54-207ENST00000451492 TBX6O95947 436 aaPredicted RBP9.07□□□□□ -0.96
USP54-207ENST00000451492 TGFB1P01137 390 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 ALDOAP04075 364 aaKnown RBP9.07□□□□□ -0.96
USP54-207ENST00000451492 RHOXF2BP0C7M4 288 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 EPB42P16452 691 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 ZNF10P21506 573 aaPredicted RBP9.07□□□□□ -0.96
USP54-207ENST00000451492 ECHS1P30084 290 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 SSR2P43308 183 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 LAPTM5Q13571 262 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 TUBA3CQ13748 450 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 MEP1AQ16819 746 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 ZNF766Q5HY98 468 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 CDKL4Q5MAI5 379 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 MED27Q6P2C8 311 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 TUBA3EQ6PEY2 450 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 CEP128Q6ZU80 1094 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 GSPT2Q8IYD1 628 aaKnown RBP9.07□□□□□ -0.96
USP54-207ENST00000451492 PLD6Q8N2A8 252 aaKnown RBP9.07□□□□□ -0.96
USP54-207ENST00000451492 ARMC2Q8NEN0 867 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 OR2L5Q8NG80 312 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 UBTD2Q8WUN7 234 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 HAS2Q92819 552 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 PHF21BQ96EK2 531 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 QRFPRQ96P65 431 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 TAAR6Q96RI8 345 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 RHOXF2Q9BQY4 288 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 UTP23Q9BRU9 249 aaKnown RBP9.07□□□□□ -0.96
USP54-207ENST00000451492 SORBS1Q9BX66 1292 aaKnown RBP9.07□□□□□ -0.96
USP54-207ENST00000451492 TSPAN10Q9H1Z9 355 aaPredicted RBP9.07□□□□□ -0.96
USP54-207ENST00000451492 MMP25Q9NPA2 562 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 SH3BGRL2Q9UJC5 107 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 FBXW2Q9UKT8 454 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 NFU1Q9UMS0 254 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 MRPS33Q9Y291 106 aaKnown RBP9.07□□□□□ -0.96
USP54-207ENST00000451492 PTPN13Q12923 2485 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 TRBV11-1A0A0K0K1C0 115 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 TGFBR3LH3BV60 316 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 LDB3O75112 727 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 IFNA16P05015 189 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 MTHFD2P13995 350 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 EDN3P14138 238 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 GSTM2P28161 218 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 TPP2P29144 1249 aaPredicted RBP9.06□□□□□ -0.96
USP54-207ENST00000451492 EEF1DP29692 281 aaKnown RBP9.06□□□□□ -0.96
USP54-207ENST00000451492 PIK3CGP48736 1102 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 RAP1GDS1P52306 607 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 MTTPP55157 894 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 LIM2P55344 173 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 ID2Q02363 134 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 TGM3Q08188 693 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 SETDB1Q15047 1291 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 ACAP2Q15057 778 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 OR1C1Q15619 314 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 TECRLQ5HYJ1 363 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 C1QL3Q5VWW1 255 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 FAM219BQ5XKK7 198 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 SPINK14Q6IE38 97 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 GRHL2Q6ISB3 625 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 ABHD17CQ6PCB6 329 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 ZNF793Q6ZN11 406 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 RPS27LQ71UM5 84 aaKnown RBP9.06□□□□□ -0.96
USP54-207ENST00000451492 TAOK1Q7L7X3 1001 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 GOLGA7Q7Z5G4 137 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 SLC5A8Q8N695 610 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 KIF18AQ8NI77 898 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 SLC44A1Q8WWI5 657 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 NCLNQ969V3 563 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 C5orf34Q96MH7 638 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 SERINC2Q96SA4 455 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 MTERF1Q99551 399 aaKnown RBP9.06□□□□□ -0.96
USP54-207ENST00000451492 MAPKAP1Q9BPZ7 522 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 MS4A8Q9BY19 250 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 OR51B5Q9H339 312 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 EHD1Q9H4M9 534 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 NT5DC2Q9H857 520 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 ACTR8Q9H981 624 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 LIN28AQ9H9Z2 209 aaKnown RBP9.06□□□□□ -0.96
USP54-207ENST00000451492 XPR1Q9UBH6 696 aa9.06□□□□□ -0.96
USP54-207ENST00000451492 PLEKHB1Q9UF11 243 aaPredicted RBP9.06□□□□□ -0.96
USP54-207ENST00000451492 FLNBO75369 2602 aaKnown RBP9.05□□□□□ -0.96
USP54-207ENST00000451492 A0A087WUV0 522 aaPredicted RBP9.05□□□□□ -0.96
USP54-207ENST00000451492 IGKV3D-11A0A0A0MRZ8 115 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 EXOC1LA0A1B0GW35 172 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 ARHGAP10A1A4S6 786 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 TRIM49D1C9J1S8 452 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 KIF2AO00139 706 aaPredicted RBP9.05□□□□□ -0.96
USP54-207ENST00000451492 LRRTM2O43300 516 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 PRKRAO75569 313 aaKnown RBP9.05□□□□□ -0.96
USP54-207ENST00000451492 UNC5CO95185 931 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 GP1BBP13224 206 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 CPN2P22792 545 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 MST1P26927 711 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 HPDP32754 393 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms