RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 C4orf17Q53FE4 359 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 MROH9Q5TGP6 573 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 HIST2H2AA3Q6FI13 130 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 TRIM40Q6P9F5 258 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 LAS2Q8IYD9 372 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 ARMC2Q8NEN0 867 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 ADAMTS18Q8TE60 1221 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 EXT2Q93063 718 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 MAGEB10Q96LZ2 347 aaPredicted RBP18.16■□□□□ 0.5
USP40-207ENST00000450940 C5orf34Q96MH7 638 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 SERINC2Q96SA4 455 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 SNX15Q9NRS6 342 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 PPIEQ9UNP9 301 aaKnown RBP18.16■□□□□ 0.5
USP40-207ENST00000450940 DIDO1Q9BTC0 2240 aaKnown RBP18.16■□□□□ 0.5
USP40-207ENST00000450940 A0A0G2JN53 185 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 SYCE1LA8MT33 242 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 CYR61O00622 381 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 B3GALT2O43825 422 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 KLK8O60259 260 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 TUBB4AP04350 444 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 STSP08842 583 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 PLA2G16P53816 162 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 MTTPP55157 894 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 BMPR2Q13873 1038 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 ACAP2Q15057 778 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 FAM83EQ2M2I3 478 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 ZNF766Q5HY98 468 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 UBAP2Q5T6F2 1119 aaKnown RBP18.15■□□□□ 0.5
USP40-207ENST00000450940 RPS19BP1Q86WX3 136 aaKnown RBP18.15■□□□□ 0.5
USP40-207ENST00000450940 ZNF595Q8IYB9 648 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 CYP4X1Q8N118 509 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 KIF2BQ8N4N8 673 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 NOA1Q8NC60 698 aaKnown RBP18.15■□□□□ 0.5
USP40-207ENST00000450940 ZNF473Q8WTR7 871 aaKnown RBP18.15■□□□□ 0.5
USP40-207ENST00000450940 KCTD4Q8WVF5 259 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 UBE2E3Q969T4 207 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 SCMH1Q96GD3 660 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 GPR78Q96P69 363 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 SIGLEC12Q96PQ1 595 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 F2RL3Q96RI0 385 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 UTP23Q9BRU9 249 aaKnown RBP18.15■□□□□ 0.5
USP40-207ENST00000450940 MS4A8Q9BY19 250 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 TRIM45Q9H8W5 580 aaPredicted RBP18.15■□□□□ 0.5
USP40-207ENST00000450940 OPTCQ9UBM4 332 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 MTRF1LQ9UGC7 380 aaKnown RBP18.15■□□□□ 0.5
USP40-207ENST00000450940 DAPP1Q9UN19 280 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 OSGIN2Q9Y236 505 aa18.15■□□□□ 0.5
USP40-207ENST00000450940 SUPT3HB4E1H0 165 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 CLDN4O14493 209 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 SUPT3HO75486 399 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 KLHL2O95198 593 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 ALDOAP04075 364 aaKnown RBP18.14■□□□□ 0.49
USP40-207ENST00000450940 SERPINB1P30740 379 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 HNRNPFP52597 415 aaKnown RBP18.14■□□□□ 0.49
USP40-207ENST00000450940 LIM2P55344 173 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 IRF9Q00978 393 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 TGM3Q08188 693 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 NAA30Q147X3 362 aaPredicted RBP18.14■□□□□ 0.49
USP40-207ENST00000450940 GLE1Q53GS7 698 aaKnown RBP18.14■□□□□ 0.49
USP40-207ENST00000450940 UBE3DQ7Z6J8 389 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 APCDD1LQ8NCL9 501 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 TMEM52Q8NDY8 209 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 SRFBP1Q8NEF9 429 aaKnown RBP18.14■□□□□ 0.49
USP40-207ENST00000450940 MNS1Q8NEH6 495 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 KCNC2Q96PR1 638 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 TBCDQ9BTW9 1192 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 ROGDIQ9GZN7 287 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 CDCP1Q9H5V8 836 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 PRTFDC1Q9NRG1 225 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 KCMF1Q9P0J7 381 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 TSC22D4Q9Y3Q8 395 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 UNC79Q9P2D8 2635 aa18.14■□□□□ 0.49
USP40-207ENST00000450940 A0A096LPK6 155 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 SYNDIG1LA6NDD5 238 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 GABRR3A8MPY1 467 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 TGFBR3LH3BV60 316 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 NEURL1O76050 574 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 EPB42P16452 691 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 MST1P26927 711 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 ECHS1P30084 290 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 TRHRP34981 398 aaPredicted RBP18.13■□□□□ 0.49
USP40-207ENST00000450940 MSH2P43246 934 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 SERPINB8P50452 374 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 GPR143P51810 404 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 MLF1P58340 268 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 SETDB1Q15047 1291 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 OR1C1Q15619 314 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 TMEM35AQ53FP2 167 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 MED27Q6P2C8 311 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 B3GNT7Q8NFL0 401 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 OR7G3Q8NG95 312 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 ISL2Q96A47 359 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 MRRFQ96E11 262 aaKnown RBP18.13■□□□□ 0.49
USP40-207ENST00000450940 CDC42EP4Q9H3Q1 356 aaKnown RBP18.13■□□□□ 0.49
USP40-207ENST00000450940 LYRM4Q9HD34 91 aa18.13■□□□□ 0.49
USP40-207ENST00000450940 MRPS33Q9Y291 106 aaKnown RBP18.13■□□□□ 0.49
USP40-207ENST00000450940 ASPDHA6ND91 283 aa18.12■□□□□ 0.49
USP40-207ENST00000450940 A8MUA0 341 aa18.12■□□□□ 0.49
USP40-207ENST00000450940 LRRTM2O43300 516 aa18.12■□□□□ 0.49
USP40-207ENST00000450940 CTNSO60931 367 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms